Summary information of deep learning profile DL0001.1

This page shows the summary of all deep learning-derived profiles and motifs for CTCF. Please scroll down the page to browse individual datasets.

Profile summary

Name: CTCF
Profile ID: DL0001.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA1929.2 MA0139.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P49711  
Source: ENCODE
Number of datasets: 448
Models: BPNet

Sequence logo

Contribution weight matrix (CWM)

A [ -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.02 -0.00 -0.00 0.06 -0.00 0.01 -0.00 -0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.01 -0.00 ]
C [ 0.00 0.01 0.01 -0.00 0.08 0.15 0.00 0.05 0.02 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.08 0.00 0.03 0.01 0.00 0.00 ]
G [ 0.00 -0.00 0.01 0.02 -0.00 -0.00 0.01 0.01 -0.00 0.00 0.16 0.07 0.05 0.14 0.09 0.00 0.05 0.01 -0.00 0.00 0.00 ]
T [ 0.00 0.01 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.02 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.01 -0.00 0.01 ]
No common motifs identified for DL0001.1.

448 models found for CTCF

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000121.1 CTCF ENCSR035OXA A549 Homo sapiens MA0139.2
BP000122.1 CTCF ENCSR036EGV foreskin keratinocyte Homo sapiens MA0139.2
BP000123.1 CTCF ENCSR037GKL stomach Homo sapiens MA0139.2
BP000124.1 CTCF ENCSR038FOS suprapubic skin Homo sapiens MA0139.2
BP000125.1 CTCF ENCSR038VWU mucosa of descending colon Homo sapiens MA0139.2
BP000126.1 CTCF ENCSR048RGR HCT116 Homo sapiens MA0139.2
BP000127.1 CTCF ENCSR059BCO HCT116 Homo sapiens MA0139.2
BP000128.1 CTCF ENCSR059KXR middle frontal area 46 Homo sapiens MA0139.2
BP000129.1 CTCF ENCSR062JAC middle frontal area 46 Homo sapiens MA0139.2
BP000130.1 CTCF ENCSR066BZZ bipolar neuron Homo sapiens MA0139.2
Showing 10 profiles of page 13 from 45 pages