Detailed information of deep learning profile BP000844.1

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This page shows detailed deep learning-derived predictions and motifs for ATF3 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ATF3
Model ID: BP000844.1
Cell line/tissue: K562
Class: Basic leucine zipper factors (bZIP)
Family: Fos-related
JASPAR ID: MA0605.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P18847  
Source: ENCSR568ZXG
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 0.01 0.00 -0.00 0.03 0.00 -0.00 -0.00 0.00 0.03 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.00 0.00 -0.00 0.00 0.02 -0.00 0.00 0.01 0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.00 0.00 0.02 0.00 0.00 0.01 -0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.04 0.00 0.00 0.00 0.00 0.02 -0.00 0.00 0.00 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 208 186 197 210 191 185 210 192 191 206 198 224 191 203 204 186 209 156 173 410 0 3 858 1 251 18 105 853 24 98 196 158 170 186 162 176 197 188 181 204 181 214 201 193 216 185 208 186 199 238 ]
C [ 235 235 239 237 215 243 228 257 228 221 276 225 248 245 231 226 230 226 77 136 6 5 3 751 185 27 745 4 335 489 253 260 230 249 278 263 225 239 225 234 238 249 233 236 246 238 220 247 262 200 ]
G [ 219 239 231 229 267 257 238 247 261 242 219 247 225 241 242 271 252 257 498 310 0 847 3 58 385 5 10 5 150 94 224 207 230 246 214 217 248 229 255 219 260 210 219 236 206 239 261 245 216 222 ]
T [ 202 204 197 188 191 179 188 168 184 195 171 168 200 175 187 181 173 225 116 8 858 9 0 54 43 814 4 2 355 183 191 239 234 183 210 208 194 208 203 207 185 191 211 199 196 202 175 186 187 204 ]

Hypothetical CWM

   
A [ 0.00 0.00 -0.00 -0.00 0.01 -0.01 -0.01 0.03 -0.02 0.00 -0.00 0.02 0.03 -0.02 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 -0.01 -0.01 -0.02 0.02 -0.00 0.00 0.02 -0.01 0.01 0.01 0.00 0.00 -0.00 ]
G [ 0.00 0.00 0.00 0.01 0.01 -0.02 0.02 -0.00 0.00 0.02 -0.01 -0.01 -0.00 0.00 -0.00 0.01 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.02 0.04 0.02 -0.01 0.00 -0.01 0.03 -0.01 -0.01 0.01 -0.00 -0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 3030

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 804

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 228

CWM

PFM

     

HCWM

10 profiles found for the same TF (ATF3) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000835.1 ATF3 ENCSR000BJY GM12878 Homo sapiens MA0605.3
BP000836.1 ATF3 ENCSR000BKC H1 Homo sapiens MA0605.3
BP000837.1 ATF3 ENCSR000BKE HepG2 Homo sapiens MA0605.3
BP000838.1 ATF3 ENCSR000BNU K562 Homo sapiens MA0605.3
BP000839.1 ATF3 ENCSR000BUG HCT116 Homo sapiens MA0605.3
BP000840.1 ATF3 ENCSR000DOG K562 Homo sapiens MA0605.3
BP000841.1 ATF3 ENCSR028UIU K562 Homo sapiens MA0605.3
BP000842.1 ATF3 ENCSR205FOW liver Homo sapiens MA0605.3
BP000843.1 ATF3 ENCSR402ZCY HepG2 Homo sapiens MA0605.3
BP000845.1 ATF3 ENCSR632DCH K562 Homo sapiens MA0605.3
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