Detailed information of deep learning profile BP000838.1

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This page shows detailed deep learning-derived predictions and motifs for ATF3 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ATF3
Model ID: BP000838.1
Cell line/tissue: K562
Class: Basic leucine zipper factors (bZIP)
Family: Fos-related
JASPAR ID: MA0605.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P18847  
Source: ENCSR000BNU
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 0.00 0.00 -0.00 0.02 0.00 0.00 0.00 0.00 0.04 -0.00 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 0.04 0.00 0.00 0.03 0.00 0.01 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 0.01 0.01 -0.00 0.04 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 0.02 0.01 -0.00 0.00 0.00 0.04 -0.00 -0.00 0.01 0.00 0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 495 451 425 442 468 404 430 459 432 415 426 473 399 436 630 233 89 1185 36 14 27 115 2469 43 342 588 389 403 402 385 359 364 405 426 387 459 438 467 474 450 472 476 487 467 465 462 476 489 455 486 ]
C [ 740 812 797 758 686 877 795 957 827 842 792 745 871 566 742 346 260 58 2397 9 46 2320 5 1127 1168 582 917 968 784 838 669 1099 680 1003 1032 754 782 825 763 799 803 739 745 776 758 756 780 715 810 717 ]
G [ 789 767 814 878 879 759 896 688 825 743 806 798 716 955 829 261 1023 1059 26 2470 5 35 19 348 361 738 780 700 886 843 1100 677 1062 670 699 857 810 760 814 764 732 806 773 785 801 797 780 795 766 795 ]
T [ 471 465 459 417 462 455 374 391 411 495 471 479 509 538 294 1655 1123 193 36 2 2417 25 2 977 624 587 409 424 423 429 367 355 348 396 377 425 465 443 444 482 488 474 490 467 471 480 459 496 464 497 ]

Hypothetical CWM

   
A [ 0.00 0.00 -0.00 -0.00 0.01 -0.00 -0.01 0.03 -0.01 0.01 0.00 0.01 0.04 -0.02 0.00 0.00 -0.00 0.00 ]
C [ 0.01 0.01 0.01 0.00 0.00 0.00 0.00 -0.03 0.04 -0.01 0.01 0.03 -0.02 0.01 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 0.01 -0.01 0.01 0.02 -0.01 0.04 -0.03 -0.00 0.01 0.00 0.00 0.01 0.01 0.01 ]
T [ 0.00 -0.00 0.00 0.00 -0.01 0.03 0.02 0.00 0.01 -0.03 0.04 -0.01 -0.02 0.02 0.00 0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 6965

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3407

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2185

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1867

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1601

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 747

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 559

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 383

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 352

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 343

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 307

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 274

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 255

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 221

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_17

Num. of seqlets: 140

CWM

PFM

     

HCWM

10 profiles found for the same TF (ATF3) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000835.1 ATF3 ENCSR000BJY GM12878 Homo sapiens MA0605.3
BP000836.1 ATF3 ENCSR000BKC H1 Homo sapiens MA0605.3
BP000837.1 ATF3 ENCSR000BKE HepG2 Homo sapiens MA0605.3
BP000839.1 ATF3 ENCSR000BUG HCT116 Homo sapiens MA0605.3
BP000840.1 ATF3 ENCSR000DOG K562 Homo sapiens MA0605.3
BP000841.1 ATF3 ENCSR028UIU K562 Homo sapiens MA0605.3
BP000842.1 ATF3 ENCSR205FOW liver Homo sapiens MA0605.3
BP000843.1 ATF3 ENCSR402ZCY HepG2 Homo sapiens MA0605.3
BP000844.1 ATF3 ENCSR568ZXG K562 Homo sapiens MA0605.3
BP000845.1 ATF3 ENCSR632DCH K562 Homo sapiens MA0605.3
Showing 10 profiles of page 1 from 1 pages
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