Detailed information of deep learning profile BP000628.1

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This page shows detailed deep learning-derived predictions and motifs for MYC in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MYC
Model ID: BP000628.1
Cell line/tissue: K562
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0147.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000FAZ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 -0.00 0.03 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.01 0.05 0.00 0.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.06 0.00 0.05 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.04 0.00 -0.00 0.00 0.00 -0.00 ]

Frequency matrix

       
A [ 469 440 475 434 452 492 396 448 413 404 404 447 454 421 422 418 408 422 414 521 495 311 76 1951 0 2 32 0 257 311 288 417 350 373 429 487 426 452 456 449 414 410 410 443 422 462 442 449 460 432 ]
C [ 675 646 677 690 694 630 657 688 675 673 750 690 699 737 626 712 704 641 735 530 429 1399 2134 0 2211 0 0 0 788 532 777 703 702 645 613 655 611 603 653 665 708 710 676 656 649 640 694 658 674 711 ]
G [ 645 679 629 634 641 626 694 666 661 728 649 633 642 633 696 656 677 776 638 762 884 297 1 0 0 2209 0 2191 787 665 597 667 728 747 776 678 703 769 684 694 665 665 658 698 708 662 690 687 665 653 ]
T [ 422 446 430 453 424 463 464 409 462 406 408 441 416 420 467 425 422 372 424 398 403 204 0 260 0 0 2179 20 379 703 549 424 431 446 393 391 471 387 418 403 424 426 467 414 432 447 385 417 412 415 ]

Hypothetical CWM

   
A [ -0.00 0.00 0.01 -0.00 -0.00 0.03 -0.05 0.02 -0.01 -0.04 -0.02 -0.01 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.01 0.05 -0.06 0.07 -0.06 0.02 -0.04 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.00 -0.03 0.02 -0.06 0.06 -0.06 0.05 0.01 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.01 -0.01 -0.04 -0.01 0.03 -0.06 0.04 -0.01 -0.00 0.01 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1559

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1317

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 399

CWM

PFM

     

HCWM

22 profiles found for the same TF (MYC) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000618.1 MYC ENCSR000DOS MCF 10A Homo sapiens MA0147.4
BP000619.1 MYC ENCSR000DYC A549 Homo sapiens MA0147.4
BP000620.1 MYC ENCSR000EBY H1 Homo sapiens MA0147.4
BP000621.1 MYC ENCSR000EGJ K562 Homo sapiens MA0147.4
BP000622.1 MYC ENCSR000EGS K562 Homo sapiens MA0147.4
BP000623.1 MYC ENCSR000EHR NB4 Homo sapiens MA0147.4
BP000624.1 MYC ENCSR000EZD HeLa-S3 Homo sapiens MA0147.4
BP000625.1 MYC ENCSR000EZU K562 Homo sapiens MA0147.4
BP000626.1 MYC ENCSR000EZV K562 Homo sapiens MA0147.4
BP000627.1 MYC ENCSR000FAG K562 Homo sapiens MA0147.4
Showing 10 profiles of page 2 from 3 pages