Detailed information of deep learning profile BP000621.1

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This page shows detailed deep learning-derived predictions and motifs for MYC in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MYC
Model ID: BP000621.1
Cell line/tissue: K562
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0147.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000EGJ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 0.00 0.00 -0.00 0.00 0.05 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.01 0.07 0.00 0.08 0.00 0.01 0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.00 0.00 0.00 0.08 0.00 0.06 0.02 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 -0.00 0.03 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1133 1157 1136 1237 1167 1048 1178 1142 1139 1112 1178 1093 1129 1112 1041 1112 1082 1092 1455 1888 998 16 5643 1 3 550 12 239 807 944 980 1006 1055 1142 1095 1146 1090 1141 1223 1024 1134 1130 1215 1182 1210 1158 1149 1096 1172 1130 ]
C [ 1788 1820 1795 1760 1746 1815 1869 1767 1793 1923 1800 1951 1917 1794 2000 2030 1967 1823 1376 1577 2082 5871 2 5855 0 1630 52 654 2784 2068 1727 2007 1838 1837 1948 1715 1710 1755 1726 1955 1863 1808 1817 1797 1751 1799 1721 1835 1764 1763 ]
G [ 1858 1837 1828 1762 1841 1847 1789 1806 1921 1729 1814 1777 1769 1828 1781 1776 1954 1901 2295 1583 2356 19 232 3 5910 6 5682 4489 1071 1617 2164 1809 2026 1971 1874 1988 2056 1892 1885 1785 1834 1830 1817 1840 1778 1793 1878 1878 1830 1861 ]
T [ 1135 1100 1155 1155 1160 1204 1078 1199 1061 1150 1122 1093 1099 1180 1092 996 911 1098 788 866 478 8 37 55 1 3728 168 532 1252 1285 1043 1092 995 964 997 1065 1058 1126 1080 1150 1083 1146 1065 1095 1175 1164 1166 1105 1148 1160 ]

Hypothetical CWM

   
A [ -0.00 0.00 0.01 0.00 -0.00 0.05 -0.07 0.03 -0.01 -0.04 -0.02 -0.01 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.02 0.07 -0.06 0.08 -0.06 0.04 -0.03 0.01 0.02 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.02 -0.04 0.04 -0.05 0.08 -0.06 0.06 0.02 -0.00 0.01 0.01 ]
T [ -0.00 -0.00 -0.01 -0.02 -0.04 -0.01 0.03 -0.07 0.04 -0.00 0.00 0.01 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3319

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3268

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2971

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1412

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1391

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 646

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 156

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 94

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 91

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 83

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 36

CWM

PFM

     

HCWM

22 profiles found for the same TF (MYC) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000608.1 MYC ENCSR000DKU GM12878 Homo sapiens MA0147.4
BP000609.1 MYC ENCSR000DLN HeLa-S3 Homo sapiens MA0147.4
BP000610.1 MYC ENCSR000DLR HepG2 Homo sapiens MA0147.4
BP000611.1 MYC ENCSR000DLU endothelial cell of umbilical vein Homo sapiens MA0147.4
BP000612.1 MYC ENCSR000DLZ K562 Homo sapiens MA0147.4
BP000613.1 MYC ENCSR000DMJ MCF-7 Homo sapiens MA0147.4
BP000614.1 MYC ENCSR000DMM MCF-7 Homo sapiens MA0147.4
BP000615.1 MYC ENCSR000DMP MCF-7 Homo sapiens MA0147.4
BP000616.1 MYC ENCSR000DMQ MCF-7 Homo sapiens MA0147.4
BP000617.1 MYC ENCSR000DOM MCF 10A Homo sapiens MA0147.4
Showing 10 profiles of page 1 from 3 pages