Detailed information of deep learning profile BP000616.1

  1. Home
  2. Deep Learning Profile > BP000616.1
This page shows detailed deep learning-derived predictions and motifs for MYC in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MYC
Model ID: BP000616.1
Cell line/tissue: MCF-7
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0147.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000DMQ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 0.00 0.00 -0.00 -0.00 0.04 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.05 0.00 0.06 0.00 0.01 0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.00 0.00 0.00 0.06 0.00 0.05 0.01 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.03 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1106 1107 1138 1157 1072 1144 1035 1150 1143 1094 1065 1165 1010 1065 1087 1048 1112 1050 1052 1357 1623 984 35 5694 0 14 455 13 446 865 1136 990 953 1048 1051 1069 1065 1018 1089 1098 1064 1087 1047 1119 1065 1089 1098 1108 1080 1119 ]
C [ 1837 1872 1819 1763 1803 1831 1872 1883 1826 1799 1922 1870 2057 1922 1727 1957 1989 1776 1929 1422 1776 1728 5864 0 5808 0 1381 53 914 2835 1912 1753 1906 1807 1893 1980 1693 1779 1857 1853 1989 1881 1868 1834 1834 1857 1853 1808 1865 1834 ]
G [ 1870 1892 1898 1875 1982 1855 1904 1870 1844 1952 1838 1851 1782 1862 2001 1838 1841 2107 1860 2386 1563 2740 4 140 2 5889 6 5561 3888 988 1612 2132 1996 2063 2013 1808 2060 2046 1895 1946 1766 1888 1878 1895 1908 1862 1877 1881 1850 1910 ]
T [ 1091 1033 1049 1109 1047 1074 1093 1001 1091 1059 1079 1018 1055 1055 1089 1061 962 971 1063 739 942 452 1 70 94 1 4062 277 656 1216 1244 1029 1049 986 947 1047 1086 1061 1063 1007 1085 1048 1111 1056 1097 1096 1076 1107 1109 1041 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.00 0.00 0.00 0.00 0.04 -0.05 0.02 -0.01 -0.04 -0.01 -0.01 -0.00 -0.01 -0.00 ]
C [ 0.01 0.01 0.00 0.00 0.01 0.05 -0.04 0.06 -0.02 0.03 -0.02 0.01 0.02 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 0.02 -0.02 0.03 -0.02 0.06 -0.04 0.05 0.01 -0.00 0.01 0.01 0.01 ]
T [ -0.00 -0.01 -0.01 -0.01 -0.02 -0.03 -0.01 0.02 -0.05 0.03 0.00 0.00 0.01 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 4318

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2505

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1908

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1623

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1371

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 842

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 576

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 372

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 249

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 159

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 126

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 62

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_17

Num. of seqlets: 50

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_20

Num. of seqlets: 23

CWM

PFM

     

HCWM

22 profiles found for the same TF (MYC) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000608.1 MYC ENCSR000DKU GM12878 Homo sapiens MA0147.4
BP000609.1 MYC ENCSR000DLN HeLa-S3 Homo sapiens MA0147.4
BP000610.1 MYC ENCSR000DLR HepG2 Homo sapiens MA0147.4
BP000611.1 MYC ENCSR000DLU endothelial cell of umbilical vein Homo sapiens MA0147.4
BP000612.1 MYC ENCSR000DLZ K562 Homo sapiens MA0147.4
BP000613.1 MYC ENCSR000DMJ MCF-7 Homo sapiens MA0147.4
BP000614.1 MYC ENCSR000DMM MCF-7 Homo sapiens MA0147.4
BP000615.1 MYC ENCSR000DMP MCF-7 Homo sapiens MA0147.4
BP000617.1 MYC ENCSR000DOM MCF 10A Homo sapiens MA0147.4
BP000618.1 MYC ENCSR000DOS MCF 10A Homo sapiens MA0147.4
Showing 10 profiles of page 1 from 3 pages