Detailed information of deep learning profile BP000618.1

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This page shows detailed deep learning-derived predictions and motifs for MYC in MCF 10A using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MYC
Model ID: BP000618.1
Cell line/tissue: MCF 10A
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0147.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000DOS
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 0.00 -0.00 0.04 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.02 0.08 -0.00 0.10 0.00 0.00 0.00 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.10 -0.00 0.09 0.01 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.06 -0.00 0.00 0.00 0.00 -0.00 ]

Frequency matrix

       
A [ 968 974 998 1016 996 1024 939 1001 940 970 924 936 946 922 902 907 862 980 948 1154 996 609 162 3536 0 5 99 0 231 755 745 868 870 893 922 952 921 945 936 1012 921 908 991 996 944 988 927 923 924 971 ]
C [ 1280 1276 1270 1266 1310 1212 1226 1219 1244 1312 1340 1377 1335 1427 1310 1365 1436 1412 1478 1066 675 3298 4285 1 4472 0 98 23 2107 1166 1530 1311 1331 1272 1385 1273 1332 1198 1319 1214 1314 1321 1235 1295 1303 1302 1303 1247 1316 1271 ]
G [ 1218 1219 1223 1227 1205 1232 1278 1289 1292 1300 1208 1197 1277 1185 1346 1216 1297 1325 1190 1363 2121 458 29 505 3 4473 3 4438 1312 1038 1017 1372 1308 1424 1279 1283 1215 1406 1208 1300 1251 1280 1218 1246 1231 1194 1227 1260 1268 1254 ]
T [ 1012 1009 987 969 967 1010 1035 969 1002 896 1006 968 920 944 920 990 883 761 862 895 686 113 2 436 3 0 4278 17 828 1519 1186 927 969 889 892 970 1010 929 1015 952 992 969 1034 941 1000 994 1021 1048 970 982 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.00 0.01 0.01 0.01 0.05 -0.09 0.04 -0.01 -0.04 -0.03 -0.01 -0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.00 0.03 0.08 -0.06 0.10 -0.03 0.06 -0.04 0.03 0.02 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.02 0.02 -0.04 0.06 -0.03 0.10 -0.06 0.09 0.02 0.01 0.01 0.01 0.01 ]
T [ -0.00 -0.00 -0.00 -0.01 -0.03 -0.05 -0.00 0.04 -0.09 0.06 0.00 0.01 0.01 0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 10637

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 5325

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 4624

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 2709

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1280

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 300

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 133

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 63

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 31

CWM

PFM

     

HCWM

22 profiles found for the same TF (MYC) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000608.1 MYC ENCSR000DKU GM12878 Homo sapiens MA0147.4
BP000609.1 MYC ENCSR000DLN HeLa-S3 Homo sapiens MA0147.4
BP000610.1 MYC ENCSR000DLR HepG2 Homo sapiens MA0147.4
BP000611.1 MYC ENCSR000DLU endothelial cell of umbilical vein Homo sapiens MA0147.4
BP000612.1 MYC ENCSR000DLZ K562 Homo sapiens MA0147.4
BP000613.1 MYC ENCSR000DMJ MCF-7 Homo sapiens MA0147.4
BP000614.1 MYC ENCSR000DMM MCF-7 Homo sapiens MA0147.4
BP000615.1 MYC ENCSR000DMP MCF-7 Homo sapiens MA0147.4
BP000616.1 MYC ENCSR000DMQ MCF-7 Homo sapiens MA0147.4
BP000617.1 MYC ENCSR000DOM MCF 10A Homo sapiens MA0147.4
Showing 10 profiles of page 1 from 3 pages