Detailed information of deep learning profile BP000626.1

  1. Home
  2. Deep Learning Profile > BP000626.1
This page shows detailed deep learning-derived predictions and motifs for MYC in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MYC
Model ID: BP000626.1
Cell line/tissue: K562
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0147.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000EZV
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 -0.00 0.03 -0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.05 0.00 0.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.06 0.00 0.04 0.01 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 -0.00 0.02 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 816 835 811 881 843 799 844 836 791 840 859 773 848 766 781 850 804 781 1053 1231 736 10 4160 1 18 447 14 317 699 772 790 674 783 855 845 803 767 822 808 794 778 775 861 855 839 822 818 793 815 759 ]
C [ 1325 1403 1354 1344 1374 1410 1391 1396 1350 1425 1332 1487 1413 1380 1496 1472 1425 1335 1066 1300 1424 4331 19 4269 3 1294 42 683 1830 1497 1286 1468 1404 1340 1450 1390 1319 1318 1332 1436 1372 1411 1407 1307 1329 1385 1324 1374 1343 1326 ]
G [ 1388 1344 1407 1343 1349 1355 1360 1320 1431 1319 1323 1292 1281 1373 1269 1339 1389 1428 1680 1169 1715 13 168 2 4351 16 4064 2813 879 1161 1457 1352 1467 1431 1390 1417 1458 1411 1470 1365 1421 1354 1329 1367 1343 1396 1373 1364 1358 1418 ]
T [ 844 791 801 805 807 809 778 821 801 789 859 821 831 854 827 712 755 829 574 673 498 19 26 101 1 2616 253 560 965 943 840 879 719 747 688 763 829 822 763 778 802 833 776 844 862 770 858 842 857 870 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.01 0.00 -0.00 0.03 -0.04 0.02 -0.01 -0.03 -0.01 -0.01 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.01 0.05 -0.05 0.05 -0.05 0.02 -0.03 0.01 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 -0.04 0.02 -0.05 0.06 -0.05 0.04 0.01 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.01 -0.01 -0.02 -0.01 0.02 -0.05 0.03 -0.00 0.00 0.01 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2178

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1486

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 456

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 282

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 196

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 121

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 120

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 56

CWM

PFM

     

HCWM

22 profiles found for the same TF (MYC) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000608.1 MYC ENCSR000DKU GM12878 Homo sapiens MA0147.4
BP000609.1 MYC ENCSR000DLN HeLa-S3 Homo sapiens MA0147.4
BP000610.1 MYC ENCSR000DLR HepG2 Homo sapiens MA0147.4
BP000611.1 MYC ENCSR000DLU endothelial cell of umbilical vein Homo sapiens MA0147.4
BP000612.1 MYC ENCSR000DLZ K562 Homo sapiens MA0147.4
BP000613.1 MYC ENCSR000DMJ MCF-7 Homo sapiens MA0147.4
BP000614.1 MYC ENCSR000DMM MCF-7 Homo sapiens MA0147.4
BP000615.1 MYC ENCSR000DMP MCF-7 Homo sapiens MA0147.4
BP000616.1 MYC ENCSR000DMQ MCF-7 Homo sapiens MA0147.4
BP000617.1 MYC ENCSR000DOM MCF 10A Homo sapiens MA0147.4
Showing 10 profiles of page 1 from 3 pages