Detailed information of deep learning profile BP000628.1

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This page shows detailed deep learning-derived predictions and motifs for MYC in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MYC
Model ID: BP000628.1
Cell line/tissue: K562
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0147.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000FAZ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 0.00 0.00 -0.00 0.00 0.04 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.05 0.00 0.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.07 0.00 0.05 0.01 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 0.03 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 415 412 417 385 447 432 414 467 426 424 403 418 387 471 391 393 446 431 424 549 703 379 20 2179 0 0 260 0 204 403 398 424 372 422 425 467 420 416 441 408 406 462 409 464 463 424 453 430 446 422 ]
C [ 653 665 687 690 662 708 698 658 665 665 694 684 769 703 678 776 747 728 667 597 665 787 2191 0 2209 0 0 1 297 884 762 638 776 677 656 696 633 642 633 649 728 661 666 694 626 641 634 629 679 645 ]
G [ 711 674 658 694 640 649 656 676 710 708 665 653 603 611 655 613 645 702 703 777 532 788 0 0 0 2211 0 2134 1399 429 530 735 641 704 712 626 737 699 690 750 673 675 688 657 630 694 690 677 646 675 ]
T [ 432 460 449 442 462 422 443 410 410 414 449 456 452 426 487 429 373 350 417 288 311 257 0 32 2 0 1951 76 311 495 521 414 422 408 418 422 421 454 447 404 404 413 448 396 492 452 434 475 440 469 ]

Hypothetical CWM

   
A [ -0.00 0.00 0.01 -0.00 -0.01 0.04 -0.06 0.03 -0.01 -0.04 -0.01 -0.01 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.01 0.05 -0.06 0.06 -0.06 0.02 -0.03 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 -0.04 0.02 -0.06 0.07 -0.06 0.05 0.01 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.01 -0.02 -0.04 -0.01 0.02 -0.05 0.03 -0.00 -0.00 0.01 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1559

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1317

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 399

CWM

PFM

     

HCWM

22 profiles found for the same TF (MYC) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000608.1 MYC ENCSR000DKU GM12878 Homo sapiens MA0147.4
BP000609.1 MYC ENCSR000DLN HeLa-S3 Homo sapiens MA0147.4
BP000610.1 MYC ENCSR000DLR HepG2 Homo sapiens MA0147.4
BP000611.1 MYC ENCSR000DLU endothelial cell of umbilical vein Homo sapiens MA0147.4
BP000612.1 MYC ENCSR000DLZ K562 Homo sapiens MA0147.4
BP000613.1 MYC ENCSR000DMJ MCF-7 Homo sapiens MA0147.4
BP000614.1 MYC ENCSR000DMM MCF-7 Homo sapiens MA0147.4
BP000615.1 MYC ENCSR000DMP MCF-7 Homo sapiens MA0147.4
BP000616.1 MYC ENCSR000DMQ MCF-7 Homo sapiens MA0147.4
BP000617.1 MYC ENCSR000DOM MCF 10A Homo sapiens MA0147.4
Showing 10 profiles of page 1 from 3 pages