Detailed information of deep learning profile BP000625.1

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This page shows detailed deep learning-derived predictions and motifs for MYC in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MYC
Model ID: BP000625.1
Cell line/tissue: K562
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0147.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000EZU
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 0.00 0.00 0.03 -0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.01 0.05 0.00 0.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.00 0.00 0.01 0.00 0.06 0.00 0.05 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.04 0.00 0.00 0.00 0.00 -0.00 ]

Frequency matrix

       
A [ 1215 1153 1120 1215 1206 1179 1202 1097 1144 1113 1119 1080 1173 1089 1043 1038 1085 1058 1172 1174 1314 1263 794 355 3364 1 90 61 84 773 953 876 1134 1040 1009 1156 1175 1164 1122 1118 1102 1083 1154 1108 1170 1166 1130 1130 1134 1126 ]
C [ 1880 1948 1865 1887 1799 1800 1882 1873 1925 1918 1883 2001 1912 2020 2045 1822 1914 1977 1876 2056 1702 1178 3800 5472 70 6020 5 375 53 2289 1584 2224 1877 2014 1794 1754 1905 1712 1834 1892 1784 1949 1845 1825 1832 1854 1807 1886 1855 1904 ]
G [ 1813 1848 1923 1790 1875 1864 1773 1828 1885 1847 1935 1757 1783 1851 1757 2049 1854 1908 2001 1779 1981 2710 923 146 2103 0 5932 94 5850 1956 1739 1513 1863 1826 2072 2031 1888 1988 2003 1873 1970 1850 1868 1886 1963 1831 1896 1828 1848 1860 ]
T [ 1119 1078 1119 1135 1147 1184 1170 1229 1073 1149 1090 1189 1159 1067 1182 1118 1174 1084 978 1018 1030 876 510 54 490 6 0 5497 40 1009 1751 1414 1153 1147 1152 1086 1059 1163 1068 1144 1171 1145 1160 1208 1062 1176 1194 1183 1190 1137 ]

Hypothetical CWM

   
A [ 0.00 -0.00 0.01 0.00 0.00 0.03 -0.05 0.03 -0.01 -0.03 -0.01 -0.01 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.01 0.05 -0.05 0.06 -0.06 0.03 -0.04 0.01 0.00 0.01 0.00 ]
G [ 0.00 0.01 0.01 0.01 -0.04 0.03 -0.06 0.06 -0.06 0.05 0.01 0.00 0.00 0.01 ]
T [ -0.00 -0.00 -0.01 -0.01 -0.03 -0.01 0.02 -0.05 0.04 0.00 0.00 0.01 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2664

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2554

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1078

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 756

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 187

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 151

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 51

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 23

CWM

PFM

     

HCWM

22 profiles found for the same TF (MYC) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000618.1 MYC ENCSR000DOS MCF 10A Homo sapiens MA0147.4
BP000619.1 MYC ENCSR000DYC A549 Homo sapiens MA0147.4
BP000620.1 MYC ENCSR000EBY H1 Homo sapiens MA0147.4
BP000621.1 MYC ENCSR000EGJ K562 Homo sapiens MA0147.4
BP000622.1 MYC ENCSR000EGS K562 Homo sapiens MA0147.4
BP000623.1 MYC ENCSR000EHR NB4 Homo sapiens MA0147.4
BP000624.1 MYC ENCSR000EZD HeLa-S3 Homo sapiens MA0147.4
BP000626.1 MYC ENCSR000EZV K562 Homo sapiens MA0147.4
BP000627.1 MYC ENCSR000FAG K562 Homo sapiens MA0147.4
BP000628.1 MYC ENCSR000FAZ K562 Homo sapiens MA0147.4
Showing 10 profiles of page 2 from 3 pages