Detailed information of deep learning profile BP000625.1

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This page shows detailed deep learning-derived predictions and motifs for MYC in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MYC
Model ID: BP000625.1
Cell line/tissue: K562
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0147.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000EZU
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 0.00 0.00 0.00 0.00 0.04 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.05 0.00 0.06 0.00 0.01 0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.06 0.00 0.05 0.01 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 -0.00 0.03 0.00 0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1137 1190 1183 1194 1176 1062 1208 1160 1145 1171 1144 1068 1163 1059 1086 1152 1147 1153 1414 1751 1009 40 5497 0 6 490 54 510 876 1030 1018 978 1084 1174 1118 1182 1067 1159 1189 1090 1149 1073 1229 1170 1184 1147 1135 1119 1078 1119 ]
C [ 1860 1848 1828 1896 1831 1963 1886 1868 1850 1970 1873 2003 1988 1888 2031 2072 1826 1863 1513 1739 1956 5850 94 5932 0 2103 146 923 2710 1981 1779 2001 1908 1854 2049 1757 1851 1783 1757 1935 1847 1885 1828 1773 1864 1875 1790 1923 1848 1813 ]
G [ 1904 1855 1886 1807 1854 1832 1825 1845 1949 1784 1892 1834 1712 1905 1754 1794 2014 1877 2224 1584 2289 53 375 5 6020 70 5472 3800 1178 1702 2056 1876 1977 1914 1822 2045 2020 1912 2001 1883 1918 1925 1873 1882 1800 1799 1887 1865 1948 1880 ]
T [ 1126 1134 1130 1130 1166 1170 1108 1154 1083 1102 1118 1122 1164 1175 1156 1009 1040 1134 876 953 773 84 61 90 1 3364 355 794 1263 1314 1174 1172 1058 1085 1038 1043 1089 1173 1080 1119 1113 1144 1097 1202 1179 1206 1215 1120 1153 1215 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.01 0.00 0.00 0.04 -0.05 0.02 -0.01 -0.03 -0.01 -0.01 -0.00 -0.00 ]
C [ 0.01 0.00 0.00 0.01 0.05 -0.06 0.06 -0.06 0.03 -0.04 0.01 0.01 0.01 0.00 ]
G [ 0.00 0.01 0.00 0.01 -0.04 0.03 -0.06 0.06 -0.05 0.05 0.01 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.01 -0.01 -0.03 -0.01 0.03 -0.05 0.03 0.00 0.00 0.01 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2664

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2554

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1078

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 756

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 187

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 151

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 51

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 23

CWM

PFM

     

HCWM

22 profiles found for the same TF (MYC) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000608.1 MYC ENCSR000DKU GM12878 Homo sapiens MA0147.4
BP000609.1 MYC ENCSR000DLN HeLa-S3 Homo sapiens MA0147.4
BP000610.1 MYC ENCSR000DLR HepG2 Homo sapiens MA0147.4
BP000611.1 MYC ENCSR000DLU endothelial cell of umbilical vein Homo sapiens MA0147.4
BP000612.1 MYC ENCSR000DLZ K562 Homo sapiens MA0147.4
BP000613.1 MYC ENCSR000DMJ MCF-7 Homo sapiens MA0147.4
BP000614.1 MYC ENCSR000DMM MCF-7 Homo sapiens MA0147.4
BP000615.1 MYC ENCSR000DMP MCF-7 Homo sapiens MA0147.4
BP000616.1 MYC ENCSR000DMQ MCF-7 Homo sapiens MA0147.4
BP000617.1 MYC ENCSR000DOM MCF 10A Homo sapiens MA0147.4
Showing 10 profiles of page 1 from 3 pages