Detailed information of deep learning profile BP000620.1

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This page shows detailed deep learning-derived predictions and motifs for MYC in H1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MYC
Model ID: BP000620.1
Cell line/tissue: H1
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0147.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000EBY
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 -0.00 0.02 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.01 0.05 0.00 0.05 0.00 0.00 0.00 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.05 0.00 0.05 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.03 0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 332 376 392 361 379 382 342 373 346 339 370 344 352 343 345 309 326 410 366 492 460 215 25 1650 0 5 25 1 89 332 242 349 340 358 364 405 396 370 359 410 373 375 370 409 407 356 370 354 364 381 ]
C [ 723 654 651 643 662 705 647 684 665 690 671 672 714 735 643 764 705 656 684 610 320 1547 2026 0 2051 0 80 0 945 477 932 664 709 617 640 685 645 642 655 618 677 666 682 688 648 683 702 674 687 646 ]
G [ 644 662 612 694 639 610 675 658 652 666 619 622 606 626 692 642 665 670 684 665 1052 240 2 302 0 2050 3 2050 682 590 491 688 682 717 724 649 625 679 642 665 660 630 657 620 630 641 613 651 611 651 ]
T [ 356 363 400 357 375 358 391 340 392 360 395 417 383 351 375 340 359 319 321 288 223 53 2 103 4 0 1947 4 339 656 390 354 324 363 327 316 389 364 399 362 345 384 346 338 370 375 370 376 393 377 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.01 -0.00 -0.00 0.03 -0.04 0.01 -0.01 -0.03 -0.02 -0.01 -0.00 -0.01 ]
C [ 0.00 0.00 -0.01 0.01 0.05 -0.05 0.05 -0.04 0.03 -0.04 0.01 0.00 0.01 0.00 ]
G [ 0.00 0.00 0.01 0.01 -0.04 0.03 -0.05 0.05 -0.06 0.05 0.00 0.00 0.00 0.01 ]
T [ -0.01 -0.00 -0.01 -0.02 -0.03 -0.01 0.01 -0.04 0.03 -0.00 -0.00 0.01 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1120

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 500

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 465

CWM

PFM

     

HCWM

22 profiles found for the same TF (MYC) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000618.1 MYC ENCSR000DOS MCF 10A Homo sapiens MA0147.4
BP000619.1 MYC ENCSR000DYC A549 Homo sapiens MA0147.4
BP000621.1 MYC ENCSR000EGJ K562 Homo sapiens MA0147.4
BP000622.1 MYC ENCSR000EGS K562 Homo sapiens MA0147.4
BP000623.1 MYC ENCSR000EHR NB4 Homo sapiens MA0147.4
BP000624.1 MYC ENCSR000EZD HeLa-S3 Homo sapiens MA0147.4
BP000625.1 MYC ENCSR000EZU K562 Homo sapiens MA0147.4
BP000626.1 MYC ENCSR000EZV K562 Homo sapiens MA0147.4
BP000627.1 MYC ENCSR000FAG K562 Homo sapiens MA0147.4
BP000628.1 MYC ENCSR000FAZ K562 Homo sapiens MA0147.4
Showing 10 profiles of page 2 from 3 pages