Detailed information of deep learning profile BP000620.1

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This page shows detailed deep learning-derived predictions and motifs for MYC in H1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MYC
Model ID: BP000620.1
Cell line/tissue: H1
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0147.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000EBY
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 0.00 0.03 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.05 0.00 0.05 0.00 0.00 0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.00 0.00 0.00 0.05 0.00 0.05 0.01 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.02 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 377 393 376 370 375 370 338 346 384 345 362 399 364 389 316 327 363 324 354 390 656 339 4 1947 0 4 103 2 53 223 288 321 319 359 340 375 351 383 417 395 360 392 340 391 358 375 357 400 363 356 ]
C [ 651 611 651 613 641 630 620 657 630 660 665 642 679 625 649 724 717 682 688 491 590 682 2050 3 2050 0 302 2 240 1052 665 684 670 665 642 692 626 606 622 619 666 652 658 675 610 639 694 612 662 644 ]
G [ 646 687 674 702 683 648 688 682 666 677 618 655 642 645 685 640 617 709 664 932 477 945 0 80 0 2051 0 2026 1547 320 610 684 656 705 764 643 735 714 672 671 690 665 684 647 705 662 643 651 654 723 ]
T [ 381 364 354 370 356 407 409 370 375 373 410 359 370 396 405 364 358 340 349 242 332 89 1 25 5 0 1650 25 215 460 492 366 410 326 309 345 343 352 344 370 339 346 373 342 382 379 361 392 376 332 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.01 -0.00 -0.00 0.03 -0.04 0.01 -0.01 -0.03 -0.02 -0.01 -0.00 -0.01 ]
C [ 0.01 0.00 0.00 0.00 0.05 -0.06 0.05 -0.05 0.03 -0.04 0.01 0.01 0.00 0.00 ]
G [ 0.00 0.01 0.00 0.01 -0.04 0.03 -0.04 0.05 -0.05 0.05 0.01 -0.01 0.00 0.00 ]
T [ -0.01 -0.00 -0.01 -0.02 -0.03 -0.01 0.01 -0.04 0.03 -0.00 -0.00 0.01 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1120

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 500

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 465

CWM

PFM

     

HCWM

22 profiles found for the same TF (MYC) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000608.1 MYC ENCSR000DKU GM12878 Homo sapiens MA0147.4
BP000609.1 MYC ENCSR000DLN HeLa-S3 Homo sapiens MA0147.4
BP000610.1 MYC ENCSR000DLR HepG2 Homo sapiens MA0147.4
BP000611.1 MYC ENCSR000DLU endothelial cell of umbilical vein Homo sapiens MA0147.4
BP000612.1 MYC ENCSR000DLZ K562 Homo sapiens MA0147.4
BP000613.1 MYC ENCSR000DMJ MCF-7 Homo sapiens MA0147.4
BP000614.1 MYC ENCSR000DMM MCF-7 Homo sapiens MA0147.4
BP000615.1 MYC ENCSR000DMP MCF-7 Homo sapiens MA0147.4
BP000616.1 MYC ENCSR000DMQ MCF-7 Homo sapiens MA0147.4
BP000617.1 MYC ENCSR000DOM MCF 10A Homo sapiens MA0147.4
Showing 10 profiles of page 1 from 3 pages