Detailed information of deep learning profile BP000541.1

This page shows detailed deep learning-derived predictions and motifs for NR3C1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR3C1
Model ID: BP000541.1
Cell line/tissue: A549
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
JASPAR ID: MA0113.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P04150  
Source: ENCSR908AOO
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ 0.00 0.00 0.00 0.01 -0.00 0.00 0.05 -0.00 0.02 -0.00 0.00 0.01 -0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.09 -0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 0.07 0.01 0.00 -0.00 0.00 ]
G [ 0.00 -0.00 0.00 0.01 0.04 0.00 -0.00 -0.00 0.00 0.01 -0.00 0.00 -0.00 0.10 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 0.04 0.00 0.07 0.01 0.00 0.01 0.00 0.00 0.00 ]

Frequency matrix

A [ 3783 3624 3648 3923 3818 3892 3655 3687 3798 3884 3785 3687 3681 3790 3807 4157 4347 4599 5439 2564 5300 12137 14 8542 2288 4790 5568 619 2 83 3324 43 1853 3079 3488 3393 3866 3673 3679 3759 3761 3632 3674 3782 3827 3952 3764 3826 3765 3780 ]
C [ 3097 3240 3194 3094 3219 3110 3351 3351 3343 3150 3166 2919 2971 2920 2928 3250 3643 2883 685 162 2330 320 13496 563 3130 2363 3324 818 1 29 2489 13709 4193 3235 1879 3178 3690 3439 3515 3138 3060 2963 3017 3147 3081 3108 3237 3201 3249 3192 ]
G [ 3183 3077 3105 3190 3085 3162 3113 3084 2933 2952 3035 3266 3569 3528 3447 3101 2429 3135 5313 9174 3245 537 194 1572 4918 2537 2770 33 13882 6 1306 4 175 3518 3595 3661 2647 2964 3014 2902 3174 3375 3407 3301 3245 3013 3227 3276 3036 3156 ]
T [ 3822 3944 3938 3678 3763 3721 3766 3763 3811 3899 3899 4013 3664 3647 3703 3377 3466 3268 2448 1985 3010 891 181 3208 3549 4195 2223 12415 0 13767 6766 129 7664 4053 4923 3653 3682 3809 3677 4086 3890 3915 3787 3655 3732 3812 3657 3582 3835 3757 ]

Hypothetical CWM

A [ -0.00 0.00 0.00 -0.00 0.02 -0.00 0.01 0.06 -0.06 0.03 -0.00 0.01 0.01 -0.01 -0.01 -0.01 0.01 -0.01 -0.01 -0.00 0.00 -0.00 0.00 ]
C [ 0.00 0.00 0.01 0.01 -0.01 -0.05 -0.01 -0.03 0.09 -0.04 0.01 -0.00 0.00 0.03 -0.02 -0.02 0.00 0.07 0.02 0.01 -0.01 0.00 0.01 ]
G [ 0.01 0.00 -0.01 0.01 0.02 0.06 0.00 -0.02 -0.02 0.02 0.01 0.00 0.01 -0.04 0.10 -0.04 -0.01 -0.05 -0.02 0.01 0.01 0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 -0.01 -0.01 0.01 -0.01 -0.01 -0.01 0.01 0.01 -0.00 0.04 -0.06 0.07 0.02 -0.00 0.02 -0.00 0.01 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 10773

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3349

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2580

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1353

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 881

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 860

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 672

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 671

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 666

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 628

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 463

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 159

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 96

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 46

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 32

Motif name: counts.pos_patterns.pattern_19

Num. of seqlets: 25

20 profiles found for the same TF (NR3C1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000533.1 NR3C1 ENCSR458VTP A549 Homo sapiens MA0113.4
BP000534.1 NR3C1 ENCSR471EKW A549 Homo sapiens MA0113.4
BP000535.1 NR3C1 ENCSR660RYY A549 Homo sapiens MA0113.4
BP000536.1 NR3C1 ENCSR686PFM A549 Homo sapiens MA0113.4
BP000537.1 NR3C1 ENCSR691GRA A549 Homo sapiens MA0113.4
BP000538.1 NR3C1 ENCSR720DXT A549 Homo sapiens MA0113.4
BP000539.1 NR3C1 ENCSR773NQB A549 Homo sapiens MA0113.4
BP000540.1 NR3C1 ENCSR857QEA A549 Homo sapiens MA0113.4
BP000542.1 NR3C1 ENCSR919OXR A549 Homo sapiens MA0113.4
BP000543.1 NR3C1 ENCSR952GOL A549 Homo sapiens MA0113.4
Showing 10 profiles of page 2 from 2 pages