Detailed information of deep learning profile BP000532.1

This page shows detailed deep learning-derived predictions and motifs for NR3C1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR3C1
Model ID: BP000532.1
Cell line/tissue: A549
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
JASPAR ID: MA0113.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P04150  
Source: ENCSR424JOE
Model: BPNet
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Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ 0.00 0.00 -0.00 0.01 -0.00 0.01 0.05 0.00 0.02 -0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.07 -0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 0.03 0.00 0.00 -0.00 0.00 ]
G [ 0.00 -0.00 0.00 0.01 0.05 -0.00 -0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 0.06 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 -0.00 0.01 -0.00 0.04 0.00 -0.00 0.00 -0.00 0.00 0.00 ]

Frequency matrix

A [ 1175 1129 1208 1170 1187 1204 1226 1156 1221 1232 1235 1153 1149 1135 1148 1394 1285 2169 54 2277 4287 7 3872 672 1293 1085 972 248 438 1037 655 857 992 1164 1008 1138 1168 1224 1171 1225 1291 1236 1169 1195 1126 1246 1166 1251 1226 1234 ]
C [ 987 968 1006 962 944 1014 999 1039 1043 975 932 1018 927 816 1172 1277 990 36 11 326 1 4282 16 1002 826 1535 571 130 194 961 2860 1436 1068 788 985 1022 1090 1057 1026 987 880 905 990 981 1002 975 1013 995 944 952 ]
G [ 935 999 940 989 939 941 932 951 955 902 964 1006 1034 1124 912 576 1031 1604 4210 729 5 4 201 923 637 982 236 3869 178 819 96 207 922 971 989 980 914 956 965 907 1008 995 976 985 926 946 974 958 1010 987 ]
T [ 1222 1223 1165 1198 1249 1160 1162 1173 1100 1210 1188 1142 1209 1244 1087 1072 1013 510 44 987 26 26 230 1722 1563 717 2540 72 3509 1502 708 1819 1337 1396 1337 1179 1147 1082 1157 1200 1140 1183 1184 1158 1265 1152 1166 1115 1139 1146 ]

Hypothetical CWM

A [ -0.00 -0.00 0.00 -0.00 0.02 -0.01 0.01 0.05 -0.04 0.03 -0.00 0.01 0.00 -0.01 -0.01 -0.01 0.01 -0.01 -0.01 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.01 0.00 -0.02 -0.04 -0.01 -0.03 0.07 -0.03 0.01 -0.00 0.00 0.01 -0.02 -0.02 -0.00 0.04 0.01 0.01 -0.00 0.00 0.00 ]
G [ 0.01 0.00 -0.01 0.01 0.01 0.05 -0.00 -0.02 -0.02 0.02 -0.00 -0.00 0.01 -0.03 0.06 -0.03 -0.01 -0.03 -0.01 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.01 -0.01 0.01 -0.01 -0.01 -0.01 0.01 0.01 -0.00 0.02 -0.04 0.04 0.01 -0.01 0.01 -0.00 0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2954

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2459

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 954

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 722

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 459

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 149

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 122

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 37

20 profiles found for the same TF (NR3C1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000534.1 NR3C1 ENCSR471EKW A549 Homo sapiens MA0113.4
BP000535.1 NR3C1 ENCSR660RYY A549 Homo sapiens MA0113.4
BP000536.1 NR3C1 ENCSR686PFM A549 Homo sapiens MA0113.4
BP000537.1 NR3C1 ENCSR691GRA A549 Homo sapiens MA0113.4
BP000538.1 NR3C1 ENCSR720DXT A549 Homo sapiens MA0113.4
BP000539.1 NR3C1 ENCSR773NQB A549 Homo sapiens MA0113.4
BP000540.1 NR3C1 ENCSR857QEA A549 Homo sapiens MA0113.4
BP000541.1 NR3C1 ENCSR908AOO A549 Homo sapiens MA0113.4
BP000542.1 NR3C1 ENCSR919OXR A549 Homo sapiens MA0113.4
BP000543.1 NR3C1 ENCSR952GOL A549 Homo sapiens MA0113.4
Showing 10 profiles of page 2 from 2 pages