Summary information of deep learning profile DL0036.1

This page shows the summary of all deep learning-derived profiles and motifs for FOXA2. Please scroll down the page to browse individual datasets.

Profile summary

Name: FOXA2
Profile ID: DL0036.1
Class: Fork head/winged helix factors
Family: FOX
JASPAR ID: MA0047.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q9Y261  
Source: ENCODE
Number of datasets: 6
Models: BPNet

Sequence logo

Contribution weight matrix (CWM)

A [ 0.00 0.00 0.00 -0.00 0.04 0.00 0.00 0.01 0.00 0.01 0.01 0.10 0.17 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.01 0.00 -0.00 0.00 -0.00 0.00 0.16 -0.00 0.05 0.02 0.00 0.03 0.01 0.00 0.01 ]
G [ 0.00 0.00 0.00 0.02 0.02 0.00 0.00 0.07 0.00 0.02 -0.00 0.00 0.00 0.00 0.00 0.01 0.01 ]
T [ -0.00 -0.00 -0.00 0.01 0.00 0.18 0.17 0.00 0.00 -0.01 0.01 0.00 0.00 0.03 -0.00 -0.00 0.00 ]

Common motifs

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 114215

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 27550

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 22173

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 6666

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 5698

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 7245

6 models found for FOXA2

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000867.1 FOXA2 ENCSR000BNI HepG2 Homo sapiens MA0047.4
BP000868.1 FOXA2 ENCSR000BRE A549 Homo sapiens MA0047.4
BP000869.1 FOXA2 ENCSR066EBK HepG2 Homo sapiens MA0047.4
BP000870.1 FOXA2 ENCSR080XEY liver Homo sapiens MA0047.4
BP000871.1 FOXA2 ENCSR310NYI liver Homo sapiens MA0047.4
BP000872.1 FOXA2 ENCSR490AMH HepG2 Homo sapiens MA0047.4
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