JASPAR - E2F1 - BP001085.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for E2F1 in WTC11 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	E2F1
Model ID:	BP001085.1
Cell line/tissue:	WTC11
Class:	Fork head/winged helix factors
Family:	E2F
JASPAR ID:	UN0490.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	Q01094
Source:	ENCSR836SPL
Model:	BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_4

Number of seqlets: 154

Contribution weight matrix (CWM)

A [	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	0.00	-0.00	-0.00	-0.00	-0.00	]
C [	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.01	0.00	0.00	0.00	0.00	0.00	-0.00	0.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.01	-0.00	0.01	-0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	]
G [	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.01	-0.00	0.00	0.00	0.00	0.01	-0.00	0.01	-0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.01	-0.00	0.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	]
T [	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	]

Frequency matrix

A [	20	18	21	21	28	19	24	19	32	21	24	24	20	32	20	23	19	22	14	18	11	20	20	14	4	4	23	28	27	27	17	22	33	24	13	6	12	17	25	22	28	22	18	25	24	18	30	21	19	22	]
C [	55	54	60	56	46	56	49	60	49	58	43	59	68	49	56	65	28	92	23	87	7	77	93	8	145	5	65	53	38	91	34	58	47	46	120	11	123	19	58	52	42	38	63	45	48	53	45	49	61	56	]
G [	62	57	59	48	60	50	60	56	45	56	69	48	47	46	48	47	88	20	102	19	114	39	27	125	3	140	28	46	79	17	76	49	48	68	14	130	8	95	40	61	63	68	40	60	59	59	56	54	54	52	]
T [	17	25	14	29	20	29	21	19	28	19	18	23	19	27	30	19	19	20	15	30	22	18	14	7	2	5	38	27	10	19	27	25	26	16	7	7	11	23	31	19	21	26	33	24	23	24	23	30	20	24	]

Hypothetical CWM

A [	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.00	-0.01	-0.01	-0.01	-0.01	-0.00	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.00	-0.01	-0.00	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	]
C [	0.00	0.00	0.00	0.00	-0.00	0.00	-0.00	0.00	-0.00	0.00	0.00	0.00	0.00	0.00	-0.00	0.00	-0.00	0.01	-0.00	0.01	-0.00	0.00	0.01	-0.01	0.01	-0.01	0.00	0.00	-0.00	0.00	-0.00	0.00	0.00	-0.00	0.01	-0.01	0.01	-0.01	0.00	-0.00	0.00	-0.00	0.00	-0.00	0.00	0.00	-0.00	0.00	0.00	0.00	]
G [	0.00	0.00	0.00	-0.00	0.00	-0.00	0.00	0.00	0.00	-0.00	0.00	0.00	0.00	0.00	0.00	-0.00	0.00	-0.00	0.01	-0.00	0.01	-0.00	-0.00	0.01	-0.01	0.01	-0.00	0.00	0.00	-0.00	0.00	-0.00	-0.00	0.00	-0.01	0.01	-0.01	0.01	-0.00	0.00	-0.00	0.00	-0.00	0.00	0.00	0.00	0.00	0.00	0.00	-0.00	]
T [	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.00	-0.01	-0.01	-0.01	-0.01	-0.00	-0.01	-0.00	-0.01	-0.01	-0.01	-0.01	-0.00	-0.01	-0.01	-0.01	-0.01	-0.00	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 795

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 539

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 341

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 138

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 119

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 116

CWM

PFM

HCWM

6 profiles found for the same TF (E2F1) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP001079.1	E2F1	ENCSR000EVJ	HeLa-S3	Homo sapiens	UN0490.2
BP001080.1	E2F1	ENCSR000EVM	HeLa-S3	Homo sapiens	UN0490.2
BP001081.1	E2F1	ENCSR000EWX	MCF-7	Homo sapiens	UN0490.2
BP001082.1	E2F1	ENCSR153DWR	K562	Homo sapiens	MA0024.3
BP001083.1	E2F1	ENCSR563LLO	K562	Homo sapiens	MA0024.3
BP001084.1	E2F1	ENCSR717ZZW	HepG2	Homo sapiens	MA0024.3