Detailed information of deep learning profile BP001079.1

This page shows detailed deep learning-derived predictions and motifs for E2F1 in HeLa-S3 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: E2F1
Model ID: BP001079.1
Cell line/tissue: HeLa-S3
Class: Fork head/winged helix factors
Family: E2F
JASPAR ID: UN0490.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q01094  
Source: ENCSR000EVJ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ 0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 ]
C [ -0.00 0.00 0.00 0.00 0.02 0.00 0.02 0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 0.04 0.00 0.02 0.00 0.00 0.00 0.00 ]
G [ -0.00 0.00 0.00 0.01 -0.00 0.03 0.00 0.01 -0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.02 0.00 0.04 0.00 0.00 0.00 -0.00 -0.00 ]
T [ 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 -0.00 ]

Frequency matrix

A [ 31 24 25 24 26 23 31 20 18 30 20 26 29 35 34 34 23 2 0 0 0 6 37 36 30 21 44 37 23 0 0 0 0 0 59 47 27 33 26 26 32 36 26 31 27 25 17 30 26 25 ]
C [ 67 76 69 76 61 82 71 61 77 73 76 75 77 82 57 51 77 64 190 0 164 67 74 67 65 90 39 29 49 19 195 0 161 124 75 39 71 64 58 72 70 62 66 65 81 77 71 72 71 64 ]
G [ 73 78 71 66 82 63 74 80 75 59 72 61 65 52 68 72 88 128 5 195 30 102 68 67 71 57 42 72 123 176 0 195 34 59 28 60 73 68 80 61 59 62 73 67 66 66 87 75 71 84 ]
T [ 24 17 30 29 26 27 19 34 25 33 27 33 24 26 36 38 7 1 0 0 1 20 16 25 29 27 70 57 0 0 0 0 0 12 33 49 24 30 31 36 34 35 30 32 21 27 20 18 27 22 ]

Hypothetical CWM

A [ -0.00 0.00 -0.00 -0.00 -0.02 -0.02 -0.02 -0.02 -0.02 -0.00 -0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.03 -0.03 -0.03 -0.04 -0.02 0.01 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.01 0.00 0.02 -0.01 0.02 0.00 0.01 0.00 0.00 0.00 0.00 -0.00 0.01 0.01 0.04 -0.02 0.03 0.01 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.02 -0.01 0.03 -0.00 0.01 -0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.03 -0.02 0.04 0.01 0.01 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.01 -0.02 -0.02 -0.02 -0.02 -0.01 -0.01 -0.00 -0.00 0.00 0.00 0.01 -0.02 -0.04 -0.03 -0.03 -0.03 -0.01 -0.00 0.00 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 322

6 profiles found for the same TF (E2F1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001080.1 E2F1 ENCSR000EVM HeLa-S3 Homo sapiens UN0490.2
BP001081.1 E2F1 ENCSR000EWX MCF-7 Homo sapiens UN0490.2
BP001082.1 E2F1 ENCSR153DWR K562 Homo sapiens MA0024.3
BP001083.1 E2F1 ENCSR563LLO K562 Homo sapiens MA0024.3
BP001084.1 E2F1 ENCSR717ZZW HepG2 Homo sapiens MA0024.3
BP001085.1 E2F1 ENCSR836SPL WTC11 Homo sapiens UN0490.2
Showing 6 profiles of page 1 from 1 pages
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