Detailed information of deep learning profile BP001082.1

This page shows detailed deep learning-derived predictions and motifs for E2F1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: E2F1
Model ID: BP001082.1
Cell line/tissue: K562
Class: Fork head/winged helix factors
Family: E2F
JASPAR ID: MA0024.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q01094  
Source: ENCSR153DWR
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 0.00 0.01 0.01 0.00 0.00 0.00 0.00 ]
C [ -0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
G [ -0.00 -0.00 0.00 0.00 0.01 0.00 0.01 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
T [ 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]

Frequency matrix

A [ 299 311 352 331 324 289 352 350 340 294 363 415 332 392 310 134 21 1 0 53 174 1471 1295 840 496 315 297 389 391 343 348 347 324 291 287 300 317 324 290 280 306 283 298 297 317 314 321 303 276 287 ]
C [ 496 502 480 455 450 479 476 477 417 408 493 429 332 316 270 206 137 1593 18 266 190 40 59 272 360 362 487 446 407 429 413 410 464 422 445 488 450 481 471 468 473 457 468 471 434 516 477 486 446 438 ]
G [ 505 533 517 535 520 519 456 458 497 610 481 407 540 443 549 1210 1428 4 1572 1242 1139 53 173 288 358 554 506 485 524 509 493 536 512 569 569 543 553 528 562 547 522 564 568 557 537 512 498 515 571 580 ]
T [ 299 253 250 278 305 312 315 314 345 287 262 348 395 448 470 49 13 1 9 38 96 35 72 199 385 368 309 279 277 318 345 306 299 317 298 268 279 266 276 304 298 295 265 274 311 257 303 295 306 294 ]

Hypothetical CWM

A [ 0.00 -0.00 0.00 -0.00 -0.00 -0.01 -0.01 -0.02 -0.01 -0.01 0.01 0.01 0.01 0.00 0.00 -0.00 ]
C [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.02 -0.00 0.01 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
G [ -0.00 -0.00 -0.00 -0.00 0.00 0.01 -0.00 0.01 0.00 0.00 -0.01 -0.00 -0.00 -0.00 -0.00 -0.00 ]
T [ 0.00 0.00 0.00 0.00 -0.01 -0.01 -0.01 -0.01 -0.01 -0.00 -0.00 0.00 0.00 0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 299

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 249

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 101

6 profiles found for the same TF (E2F1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001079.1 E2F1 ENCSR000EVJ HeLa-S3 Homo sapiens UN0490.2
BP001080.1 E2F1 ENCSR000EVM HeLa-S3 Homo sapiens UN0490.2
BP001081.1 E2F1 ENCSR000EWX MCF-7 Homo sapiens UN0490.2
BP001083.1 E2F1 ENCSR563LLO K562 Homo sapiens MA0024.3
BP001084.1 E2F1 ENCSR717ZZW HepG2 Homo sapiens MA0024.3
BP001085.1 E2F1 ENCSR836SPL WTC11 Homo sapiens UN0490.2
Showing 6 profiles of page 1 from 1 pages
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