Detailed information of deep learning profile BP001083.1

This page shows detailed deep learning-derived predictions and motifs for E2F1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: E2F1
Model ID: BP001083.1
Cell line/tissue: K562
Class: Fork head/winged helix factors
Family: E2F
JASPAR ID: MA0024.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q01094  
Source: ENCSR563LLO
Model: BPNet
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Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 0.01 0.01 0.00 0.00 ]
C [ 0.00 0.00 0.00 0.00 0.01 0.00 0.06 0.00 0.01 0.00 0.00 -0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.01 0.05 -0.00 0.06 0.02 0.02 -0.00 0.00 0.00 0.00 ]
T [ 0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 ]

Frequency matrix

A [ 1223 1273 1279 1312 1133 1188 1398 1250 1215 1231 1253 1152 1302 1577 1306 1235 1438 1711 1726 1825 1099 487 1 2 3 7 102 4249 2806 1823 1447 1101 1206 1226 1318 1236 1079 1438 1171 1216 1204 1204 1448 1432 1166 1091 1284 1186 1288 1161 ]
C [ 1655 1937 1760 1895 1908 1982 1747 1698 1626 1907 1617 1744 1749 1577 1645 1621 1487 1727 1312 1242 746 1784 26 6205 3 2112 733 971 767 1662 1437 1853 1612 1625 1770 1574 1888 1661 1950 1654 1581 1930 1615 1683 1678 1976 1612 1997 1831 1647 ]
G [ 1989 1905 2097 1882 2067 1921 1909 2106 2359 1940 1975 2247 2110 1902 2187 2130 2410 1681 2020 1748 2657 3929 6181 1 6201 4063 5195 528 1489 1702 1667 1874 2284 2347 2132 1989 2006 2015 1992 1983 2379 1937 2043 2036 2222 1979 1998 1951 1967 2289 ]
T [ 1342 1094 1073 1120 1101 1118 1155 1155 1009 1131 1364 1066 1048 1153 1071 1223 874 1090 1151 1394 1707 9 1 1 2 27 179 461 1147 1022 1658 1381 1107 1011 989 1410 1236 1095 1096 1356 1045 1138 1103 1058 1143 1163 1315 1075 1123 1112 ]

Hypothetical CWM

A [ 0.00 -0.00 -0.00 -0.01 -0.01 -0.04 -0.04 -0.05 -0.04 -0.03 0.01 0.01 0.00 0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.02 0.00 0.06 -0.00 0.03 0.00 0.01 -0.01 0.00 -0.00 ]
G [ 0.00 0.00 -0.00 0.01 0.01 0.05 -0.01 0.06 0.02 0.03 -0.01 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.04 -0.04 -0.05 -0.04 -0.04 -0.01 -0.00 -0.00 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 39

6 profiles found for the same TF (E2F1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001079.1 E2F1 ENCSR000EVJ HeLa-S3 Homo sapiens UN0490.2
BP001080.1 E2F1 ENCSR000EVM HeLa-S3 Homo sapiens UN0490.2
BP001081.1 E2F1 ENCSR000EWX MCF-7 Homo sapiens UN0490.2
BP001082.1 E2F1 ENCSR153DWR K562 Homo sapiens MA0024.3
BP001084.1 E2F1 ENCSR717ZZW HepG2 Homo sapiens MA0024.3
BP001085.1 E2F1 ENCSR836SPL WTC11 Homo sapiens UN0490.2
Showing 6 profiles of page 1 from 1 pages
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