JASPAR - E2F1 - BP001080.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for E2F1 in HeLa-S3 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	E2F1
Model ID:	BP001080.1
Cell line/tissue:	HeLa-S3
Class:	Fork head/winged helix factors
Family:	E2F
JASPAR ID:	UN0490.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	Q01094
Source:	ENCSR000EVM
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_3

Number of seqlets: 327

Contribution weight matrix (CWM)

A [	-0.00	-0.00	-0.00	-0.00	0.00	0.00	0.00	0.00	0.00	0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	0.00	0.00	0.00	-0.00	-0.00	-0.00	-0.00	]
C [	0.00	0.00	0.00	0.01	0.00	0.05	0.00	0.04	0.01	0.00	0.00	0.00	0.00	0.00	0.00	0.01	0.00	0.04	0.00	0.02	0.00	0.00	0.00	0.00	]
G [	0.00	0.00	0.00	0.01	0.03	0.00	0.05	0.00	0.01	0.00	0.00	0.00	0.00	0.00	0.01	0.00	0.03	0.00	0.04	0.00	0.01	0.00	0.00	0.00	]
T [	-0.00	-0.00	0.00	0.00	0.00	0.00	0.00	0.00	-0.00	-0.00	-0.00	-0.00	0.00	-0.00	0.00	-0.00	0.00	0.00	0.00	-0.00	-0.00	-0.00	-0.00	-0.00	]

Frequency matrix

A [	43	45	29	41	37	39	47	42	52	54	49	40	47	35	81	65	27	0	0	0	0	0	78	87	49	49	46	29	32	1	0	0	0	5	50	51	42	43	35	36	42	43	44	33	35	42	43	41	35	45	]
C [	128	133	134	136	137	127	109	120	111	119	102	133	121	125	94	64	98	39	327	0	288	188	134	87	79	108	105	81	181	80	323	8	254	143	132	109	119	122	116	124	118	130	121	118	120	134	100	113	129	128	]
G [	121	119	129	116	114	123	122	120	111	103	125	117	112	118	82	133	202	288	0	327	39	113	71	97	151	113	104	157	111	246	4	319	70	147	96	109	116	123	130	127	119	115	116	135	130	107	143	123	123	108	]
T [	35	30	35	34	39	38	49	45	53	51	51	37	47	49	70	65	0	0	0	0	0	26	44	56	48	57	72	60	3	0	0	0	3	32	49	58	50	39	46	40	48	39	46	41	42	44	41	50	40	46	]

Hypothetical CWM

A [	-0.00	-0.01	-0.00	-0.00	-0.01	-0.04	-0.04	-0.04	-0.06	-0.04	-0.00	-0.00	0.00	-0.01	-0.00	-0.01	-0.01	-0.03	-0.03	-0.03	-0.04	-0.03	-0.01	-0.01	-0.00	-0.01	]
C [	0.00	0.01	0.00	0.00	0.02	0.01	0.05	-0.02	0.04	0.01	0.01	0.01	0.01	0.01	0.01	0.00	0.02	0.01	0.04	-0.01	0.03	0.01	0.01	0.01	0.01	0.01	]
G [	0.01	0.01	0.00	0.01	0.01	0.04	-0.02	0.05	0.01	0.02	0.00	0.01	0.01	0.01	0.01	0.01	0.01	0.03	-0.01	0.04	0.01	0.02	0.00	0.01	0.01	0.00	]
T [	-0.01	-0.00	-0.00	-0.00	-0.03	-0.06	-0.04	-0.04	-0.04	-0.01	-0.01	-0.00	-0.01	0.00	-0.01	-0.01	-0.03	-0.04	-0.03	-0.03	-0.03	-0.01	-0.01	-0.00	-0.01	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 107

CWM

PFM

HCWM

6 profiles found for the same TF (E2F1) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP001079.1	E2F1	ENCSR000EVJ	HeLa-S3	Homo sapiens	UN0490.2
BP001081.1	E2F1	ENCSR000EWX	MCF-7	Homo sapiens	UN0490.2
BP001082.1	E2F1	ENCSR153DWR	K562	Homo sapiens	MA0024.3
BP001083.1	E2F1	ENCSR563LLO	K562	Homo sapiens	MA0024.3
BP001084.1	E2F1	ENCSR717ZZW	HepG2	Homo sapiens	MA0024.3
BP001085.1	E2F1	ENCSR836SPL	WTC11	Homo sapiens	UN0490.2