JASPAR - E2F1 - BP001085.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for E2F1 in WTC11 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	E2F1
Model ID:	BP001085.1
Cell line/tissue:	WTC11
Class:	Fork head/winged helix factors
Family:	E2F
JASPAR ID:	UN0490.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	Q01094
Source:	ENCSR836SPL
Model:	BPNet
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Sequence logo

Motif name: counts.pos_patterns.pattern_4

Number of seqlets: 154

Contribution weight matrix (CWM)

A [	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	]
C [	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.01	-0.00	0.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	-0.00	0.01	-0.00	0.01	0.00	0.00	0.00	-0.00	0.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	]
G [	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	-0.00	0.01	-0.00	0.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.01	-0.00	0.00	0.00	0.00	0.00	0.00	0.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	]
T [	-0.00	-0.00	-0.00	-0.00	0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	]

Frequency matrix

A [	24	20	30	23	24	23	24	33	26	21	19	31	23	11	7	7	16	26	25	27	19	10	27	38	5	2	7	14	18	22	30	15	20	19	19	30	27	19	23	18	19	28	19	21	29	20	29	14	25	17	]
C [	52	54	54	56	59	59	60	40	68	63	61	40	95	8	130	14	68	48	49	76	17	79	46	28	140	3	125	27	39	114	19	102	20	88	47	48	46	47	48	69	56	45	56	60	50	60	48	59	57	62	]
G [	56	61	49	45	53	48	45	63	38	42	52	58	19	123	11	120	46	47	58	34	91	38	53	65	5	145	8	93	77	7	87	23	92	28	65	56	49	68	59	43	58	49	60	49	56	46	56	60	54	55	]
T [	22	19	21	30	18	24	25	18	22	28	22	25	17	12	6	13	24	33	22	17	27	27	28	23	4	4	14	20	20	11	18	14	22	19	23	20	32	20	24	24	21	32	19	24	19	28	21	21	18	20	]

Hypothetical CWM

A [	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.00	-0.01	-0.01	-0.01	-0.01	-0.00	-0.01	-0.01	-0.01	-0.01	-0.00	-0.01	-0.00	-0.01	-0.01	-0.01	-0.01	-0.00	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	]
C [	-0.00	0.00	0.00	0.00	0.00	0.00	0.00	-0.00	0.00	-0.00	0.00	-0.00	0.01	-0.01	0.01	-0.01	0.00	-0.00	-0.00	0.00	-0.00	0.00	0.00	-0.00	0.01	-0.01	0.01	-0.00	-0.00	0.01	-0.00	0.01	-0.00	0.00	-0.00	0.00	0.00	0.00	0.00	0.00	-0.00	0.00	0.00	0.00	-0.00	0.00	-0.00	0.00	0.00	0.00	]
G [	0.00	0.00	0.00	-0.00	0.00	0.00	-0.00	0.00	-0.00	0.00	-0.00	0.00	-0.01	0.01	-0.01	0.01	-0.00	0.00	0.00	-0.00	0.00	-0.00	0.00	0.00	-0.01	0.01	-0.01	0.01	0.00	-0.00	0.01	-0.00	0.01	-0.00	0.00	-0.00	0.00	0.00	0.00	0.00	0.00	-0.00	0.00	-0.00	0.00	-0.00	0.00	0.00	0.00	0.00	]
T [	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.00	-0.01	-0.00	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.00	-0.01	-0.01	-0.01	-0.01	-0.00	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	-0.01	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 795

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 539

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 341

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 138

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 119

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 116

CWM

PFM

HCWM

6 profiles found for the same TF (E2F1) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP001079.1	E2F1	ENCSR000EVJ	HeLa-S3	Homo sapiens	UN0490.2
BP001080.1	E2F1	ENCSR000EVM	HeLa-S3	Homo sapiens	UN0490.2
BP001081.1	E2F1	ENCSR000EWX	MCF-7	Homo sapiens	UN0490.2
BP001082.1	E2F1	ENCSR153DWR	K562	Homo sapiens	MA0024.3
BP001083.1	E2F1	ENCSR563LLO	K562	Homo sapiens	MA0024.3
BP001084.1	E2F1	ENCSR717ZZW	HepG2	Homo sapiens	MA0024.3