Detailed information of deep learning profile BP001084.1

This page shows detailed deep learning-derived predictions and motifs for E2F1 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: E2F1
Model ID: BP001084.1
Cell line/tissue: HepG2
Class: Fork head/winged helix factors
Family: E2F
JASPAR ID: MA0024.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q01094  
Source: ENCSR717ZZW
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 0.00 ]
C [ -0.00 -0.00 0.00 0.00 0.01 0.00 0.03 0.00 0.03 0.00 0.01 0.00 0.00 -0.00 ]
G [ -0.00 0.00 -0.00 0.00 0.00 0.01 0.00 0.03 0.00 0.01 0.00 0.00 0.00 0.00 ]
T [ 0.00 0.00 0.00 0.01 -0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 ]

Frequency matrix

A [ 258 234 233 231 266 256 254 249 229 260 250 230 253 229 248 232 240 260 298 245 264 279 296 424 403 335 244 99 67 4 0 1 2 1 270 323 331 275 249 237 277 319 307 255 256 258 234 236 261 263 ]
C [ 500 480 497 448 484 478 470 494 484 503 482 482 473 491 497 474 466 436 413 492 447 408 410 388 305 296 232 102 902 702 1420 1 1394 291 826 309 407 338 397 445 425 397 385 445 453 459 516 488 465 463 ]
G [ 436 478 459 485 471 455 463 433 455 421 475 439 448 429 414 455 478 479 456 385 345 396 446 327 351 241 130 191 400 713 11 1429 35 1112 199 368 401 385 422 409 425 425 447 481 465 470 445 456 463 460 ]
T [ 237 239 242 267 210 242 244 255 263 247 224 280 257 282 272 270 247 256 264 309 375 348 279 292 372 559 825 1039 62 12 0 0 0 27 136 431 292 433 363 340 304 290 292 250 257 244 236 251 242 245 ]

Hypothetical CWM

A [ 0.00 -0.00 -0.00 -0.01 -0.01 -0.02 -0.02 -0.03 -0.03 -0.03 -0.00 -0.01 -0.00 -0.00 ]
C [ -0.00 -0.00 -0.00 -0.01 0.01 0.01 0.03 -0.00 0.03 0.01 0.01 -0.00 0.00 -0.00 ]
G [ -0.00 -0.00 -0.00 0.00 0.00 0.02 -0.00 0.03 0.00 0.02 -0.00 0.00 -0.00 0.00 ]
T [ 0.00 0.00 0.01 0.01 -0.02 -0.02 -0.03 -0.03 -0.03 -0.01 -0.01 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2331

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 132

6 profiles found for the same TF (E2F1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001079.1 E2F1 ENCSR000EVJ HeLa-S3 Homo sapiens UN0490.2
BP001080.1 E2F1 ENCSR000EVM HeLa-S3 Homo sapiens UN0490.2
BP001081.1 E2F1 ENCSR000EWX MCF-7 Homo sapiens UN0490.2
BP001082.1 E2F1 ENCSR153DWR K562 Homo sapiens MA0024.3
BP001083.1 E2F1 ENCSR563LLO K562 Homo sapiens MA0024.3
BP001085.1 E2F1 ENCSR836SPL WTC11 Homo sapiens UN0490.2
Showing 6 profiles of page 1 from 1 pages
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