Detailed information of deep learning profile BP001083.1

This page shows detailed deep learning-derived predictions and motifs for E2F1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: E2F1
Model ID: BP001083.1
Cell line/tissue: K562
Class: Fork head/winged helix factors
Family: E2F
JASPAR ID: MA0024.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q01094  
Source: ENCSR563LLO
Model: BPNet
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Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.02 0.02 0.06 -0.00 0.05 0.01 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 -0.00 0.00 0.00 0.01 0.00 0.06 0.00 0.01 0.00 0.00 0.00 0.00 ]
T [ 0.00 0.00 0.01 0.01 -0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]

Frequency matrix

A [ 1112 1123 1075 1315 1163 1143 1058 1103 1138 1045 1356 1096 1095 1236 1410 989 1011 1107 1381 1658 1022 1147 461 179 27 2 1 1 9 1707 1394 1151 1090 874 1223 1071 1153 1048 1066 1364 1131 1009 1155 1155 1118 1101 1120 1073 1094 1342 ]
C [ 2289 1967 1951 1998 1979 2222 2036 2043 1937 2379 1983 1992 2015 2006 1989 2132 2347 2284 1874 1667 1702 1489 528 5195 4063 6201 1 6181 3929 2657 1748 2020 1681 2410 2130 2187 1902 2110 2247 1975 1940 2359 2106 1909 1921 2067 1882 2097 1905 1989 ]
G [ 1647 1831 1997 1612 1976 1678 1683 1615 1930 1581 1654 1950 1661 1888 1574 1770 1625 1612 1853 1437 1662 767 971 733 2112 3 6205 26 1784 746 1242 1312 1727 1487 1621 1645 1577 1749 1744 1617 1907 1626 1698 1747 1982 1908 1895 1760 1937 1655 ]
T [ 1161 1288 1186 1284 1091 1166 1432 1448 1204 1204 1216 1171 1438 1079 1236 1318 1226 1206 1101 1447 1823 2806 4249 102 7 3 2 1 487 1099 1825 1726 1711 1438 1235 1306 1577 1302 1152 1253 1231 1215 1250 1398 1188 1133 1312 1279 1273 1223 ]

Hypothetical CWM

A [ 0.00 -0.00 -0.00 -0.00 -0.01 -0.04 -0.04 -0.05 -0.04 -0.04 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.01 0.03 0.02 0.06 -0.01 0.05 0.01 0.01 -0.00 0.00 0.00 ]
G [ -0.00 0.00 -0.01 0.01 0.00 0.03 -0.00 0.06 0.00 0.02 -0.00 0.00 0.00 0.00 ]
T [ 0.00 0.00 0.01 0.01 -0.03 -0.04 -0.05 -0.04 -0.04 -0.01 -0.01 -0.00 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 39

6 profiles found for the same TF (E2F1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001079.1 E2F1 ENCSR000EVJ HeLa-S3 Homo sapiens UN0490.2
BP001080.1 E2F1 ENCSR000EVM HeLa-S3 Homo sapiens UN0490.2
BP001081.1 E2F1 ENCSR000EWX MCF-7 Homo sapiens UN0490.2
BP001082.1 E2F1 ENCSR153DWR K562 Homo sapiens MA0024.3
BP001084.1 E2F1 ENCSR717ZZW HepG2 Homo sapiens MA0024.3
BP001085.1 E2F1 ENCSR836SPL WTC11 Homo sapiens UN0490.2
Showing 6 profiles of page 1 from 1 pages
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