Detailed information of deep learning profile BP001082.1

This page shows detailed deep learning-derived predictions and motifs for E2F1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: E2F1
Model ID: BP001082.1
Cell line/tissue: K562
Class: Fork head/winged helix factors
Family: E2F
JASPAR ID: MA0024.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q01094  
Source: ENCSR153DWR
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]
C [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.01 0.00 0.01 0.00 0.00 -0.00 -0.00 ]
G [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.02 0.00 0.00 0.00 0.00 -0.00 ]
T [ 0.00 0.00 0.00 0.00 0.01 0.01 0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 ]

Frequency matrix

A [ 294 306 295 303 257 311 274 265 295 298 304 276 266 279 268 298 317 299 306 345 318 277 279 309 368 385 199 72 35 96 38 9 1 13 49 470 448 395 348 262 287 345 314 315 312 305 278 250 253 299 ]
C [ 580 571 515 498 512 537 557 568 564 522 547 562 528 553 543 569 569 512 536 493 509 524 485 506 554 358 288 173 53 1139 1242 1572 4 1428 1210 549 443 540 407 481 610 497 458 456 519 520 535 517 533 505 ]
G [ 438 446 486 477 516 434 471 468 457 473 468 471 481 450 488 445 422 464 410 413 429 407 446 487 362 360 272 59 40 190 266 18 1593 137 206 270 316 332 429 493 408 417 477 476 479 450 455 480 502 496 ]
T [ 287 276 303 321 314 317 297 298 283 306 280 290 324 317 300 287 291 324 347 348 343 391 389 297 315 496 840 1295 1471 174 53 0 1 21 134 310 392 332 415 363 294 340 350 352 289 324 331 352 311 299 ]

Hypothetical CWM

A [ 0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.01 -0.01 -0.01 -0.01 -0.01 0.00 0.00 0.00 0.00 ]
C [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.01 0.00 0.00 0.01 -0.00 0.01 0.00 -0.00 -0.00 -0.00 -0.00 ]
G [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.01 -0.00 0.02 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
T [ -0.00 0.00 0.00 0.01 0.01 0.01 -0.01 -0.01 -0.02 -0.01 -0.01 -0.00 -0.00 0.00 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 299

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 249

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 101

6 profiles found for the same TF (E2F1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001079.1 E2F1 ENCSR000EVJ HeLa-S3 Homo sapiens UN0490.2
BP001080.1 E2F1 ENCSR000EVM HeLa-S3 Homo sapiens UN0490.2
BP001081.1 E2F1 ENCSR000EWX MCF-7 Homo sapiens UN0490.2
BP001083.1 E2F1 ENCSR563LLO K562 Homo sapiens MA0024.3
BP001084.1 E2F1 ENCSR717ZZW HepG2 Homo sapiens MA0024.3
BP001085.1 E2F1 ENCSR836SPL WTC11 Homo sapiens UN0490.2
Showing 6 profiles of page 1 from 1 pages
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