JASPAR - E2F1 - BP001080.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for E2F1 in HeLa-S3 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	E2F1
Model ID:	BP001080.1
Cell line/tissue:	HeLa-S3
Class:	Fork head/winged helix factors
Family:	E2F
JASPAR ID:	UN0490.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	Q01094
Source:	ENCSR000EVM
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_3

Number of seqlets: 327

Contribution weight matrix (CWM)

A [	-0.00	-0.00	-0.00	-0.00	-0.00	0.00	0.00	0.00	-0.00	0.00	-0.00	0.00	-0.00	-0.00	-0.00	-0.00	0.00	0.00	0.00	0.00	0.00	0.00	-0.00	-0.00	]
C [	0.00	0.00	0.00	0.01	0.00	0.04	0.00	0.03	0.00	0.01	0.00	0.00	0.00	0.00	0.00	0.01	0.00	0.05	0.00	0.03	0.01	0.00	0.00	0.00	]
G [	0.00	0.00	0.00	0.00	0.02	0.00	0.04	0.00	0.01	0.00	0.00	0.00	0.00	0.00	0.00	0.01	0.04	0.00	0.05	0.00	0.01	0.00	0.00	0.00	]
T [	-0.00	-0.00	-0.00	-0.00	0.00	0.00	0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	0.00	0.00	0.00	0.00	0.00	0.00	-0.00	-0.00	-0.00	-0.00	]

Frequency matrix

A [	46	40	50	41	44	42	41	46	39	48	40	46	39	50	58	49	32	3	0	0	0	3	60	72	57	48	56	44	26	0	0	0	0	0	65	70	49	47	37	51	51	53	45	49	38	39	34	35	30	35	]
C [	108	123	123	143	107	130	135	116	115	119	127	130	123	116	109	96	147	70	319	4	246	111	157	104	113	151	97	71	113	39	327	0	288	202	133	82	118	112	117	125	103	111	120	122	123	114	116	129	119	121	]
G [	128	129	113	100	134	120	118	121	130	118	124	116	122	119	109	132	143	254	8	323	80	181	81	105	108	79	87	134	188	288	0	327	39	98	64	94	125	121	133	102	119	111	120	109	127	137	136	134	133	128	]
T [	45	35	41	43	42	35	33	44	43	42	36	35	43	42	51	50	5	0	0	0	1	32	29	46	49	49	87	78	0	0	0	0	0	27	65	81	35	47	40	49	54	52	42	47	39	37	41	29	45	43	]

Hypothetical CWM

A [	-0.00	-0.01	-0.00	-0.01	-0.01	-0.03	-0.03	-0.03	-0.04	-0.03	-0.01	-0.01	0.00	-0.01	-0.00	-0.01	-0.01	-0.04	-0.04	-0.04	-0.06	-0.03	-0.00	-0.00	-0.00	-0.01	]
C [	0.00	0.01	0.01	0.00	0.02	0.01	0.04	-0.01	0.03	0.01	0.01	0.01	0.01	0.01	0.01	0.00	0.02	0.01	0.05	-0.02	0.04	0.01	0.01	0.00	0.01	0.01	]
G [	0.01	0.01	0.01	0.01	0.01	0.03	-0.01	0.04	0.01	0.02	0.00	0.01	0.01	0.01	0.01	0.01	0.01	0.04	-0.02	0.05	0.01	0.02	0.00	0.00	0.01	0.00	]
T [	-0.01	-0.00	-0.01	-0.01	-0.03	-0.04	-0.03	-0.03	-0.03	-0.01	-0.01	-0.00	-0.01	0.00	-0.00	-0.00	-0.04	-0.06	-0.04	-0.04	-0.04	-0.01	-0.00	-0.00	-0.01	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 107

CWM

PFM

HCWM

6 profiles found for the same TF (E2F1) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP001079.1	E2F1	ENCSR000EVJ	HeLa-S3	Homo sapiens	UN0490.2
BP001081.1	E2F1	ENCSR000EWX	MCF-7	Homo sapiens	UN0490.2
BP001082.1	E2F1	ENCSR153DWR	K562	Homo sapiens	MA0024.3
BP001083.1	E2F1	ENCSR563LLO	K562	Homo sapiens	MA0024.3
BP001084.1	E2F1	ENCSR717ZZW	HepG2	Homo sapiens	MA0024.3
BP001085.1	E2F1	ENCSR836SPL	WTC11	Homo sapiens	UN0490.2