Detailed information of deep learning profile BP001079.1

This page shows detailed deep learning-derived predictions and motifs for E2F1 in HeLa-S3 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: E2F1
Model ID: BP001079.1
Cell line/tissue: HeLa-S3
Class: Fork head/winged helix factors
Family: E2F
JASPAR ID: UN0490.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q01094  
Source: ENCSR000EVJ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ -0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 ]
C [ -0.00 -0.00 0.00 0.00 0.00 0.04 0.00 0.02 0.00 0.00 0.00 -0.00 0.00 0.00 -0.00 0.01 0.00 0.03 -0.00 0.01 0.00 0.00 -0.00 ]
G [ 0.00 0.00 0.00 0.00 0.02 0.00 0.04 0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 0.02 0.00 0.02 0.00 0.00 0.00 -0.00 ]
T [ -0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 ]

Frequency matrix

A [ 22 27 18 20 27 21 32 30 35 34 36 31 30 24 49 33 12 0 0 0 0 0 57 70 27 29 25 16 20 1 0 0 1 7 38 36 26 24 33 27 33 25 34 19 27 26 29 30 17 24 ]
C [ 84 71 75 87 66 66 67 73 62 59 61 80 68 73 60 28 59 34 195 0 176 123 72 42 57 71 67 68 102 30 195 5 128 88 72 68 52 65 61 72 59 75 80 74 63 82 66 71 78 73 ]
G [ 64 71 72 71 77 81 65 66 62 70 72 58 64 71 39 75 124 161 0 195 19 49 29 39 90 65 67 74 67 164 0 190 64 77 51 57 82 77 75 76 73 77 61 71 82 61 76 69 76 67 ]
T [ 25 26 30 17 25 27 31 26 36 32 26 26 33 27 47 59 0 0 0 0 0 23 37 44 21 30 36 37 6 0 0 0 2 23 34 34 35 29 26 20 30 18 20 31 23 26 24 25 24 31 ]

Hypothetical CWM

A [ 0.00 -0.00 0.00 -0.00 -0.01 -0.03 -0.03 -0.03 -0.04 -0.02 0.01 0.00 0.00 -0.00 -0.00 -0.01 -0.01 -0.02 -0.02 -0.02 -0.02 -0.01 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.01 0.01 0.04 -0.02 0.03 0.01 0.00 0.00 0.00 0.00 0.00 -0.00 0.01 -0.00 0.03 -0.01 0.02 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.01 0.03 -0.02 0.04 0.01 0.01 -0.00 0.00 0.00 0.00 0.00 0.01 0.00 0.02 -0.01 0.02 0.00 0.01 0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 0.01 -0.02 -0.04 -0.03 -0.03 -0.03 -0.00 -0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.02 -0.02 -0.02 -0.02 -0.02 -0.00 -0.00 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 322

6 profiles found for the same TF (E2F1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001080.1 E2F1 ENCSR000EVM HeLa-S3 Homo sapiens UN0490.2
BP001081.1 E2F1 ENCSR000EWX MCF-7 Homo sapiens UN0490.2
BP001082.1 E2F1 ENCSR153DWR K562 Homo sapiens MA0024.3
BP001083.1 E2F1 ENCSR563LLO K562 Homo sapiens MA0024.3
BP001084.1 E2F1 ENCSR717ZZW HepG2 Homo sapiens MA0024.3
BP001085.1 E2F1 ENCSR836SPL WTC11 Homo sapiens UN0490.2
Showing 6 profiles of page 1 from 1 pages
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