Detailed information of deep learning profile BP000989.1

  1. Home
  2. Deep Learning Profile > BP000989.1
This page shows detailed deep learning-derived predictions and motifs for NR2C2 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR2C2
Model ID: BP000989.1
Cell line/tissue: K562
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
JASPAR ID: MA0504.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P49116  
Source: ENCSR750LYM
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 0.00 0.01 -0.00 -0.00 -0.00 -0.00 0.04 0.01 0.03 -0.00 -0.00 -0.00 -0.00 0.02 0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 0.03 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.03 -0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 -0.00 0.00 0.01 0.03 0.03 -0.00 -0.00 0.00 0.00 0.00 0.04 0.03 0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 ]
T [ 0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.00 0.03 0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.03 0.00 -0.00 0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1315 1230 1286 1214 1331 1315 1296 1359 1219 1301 1257 1408 1442 1308 1229 1148 951 1659 1494 2947 312 162 86 86 4552 2883 4071 176 131 165 218 3704 1402 1495 1120 1204 1199 1313 1273 1317 1335 1215 1270 1284 1228 1324 1191 1276 1239 1266 ]
C [ 1087 1194 1114 1147 1131 1118 1127 1101 1209 1149 1068 1090 1034 1099 1218 1357 1536 1055 714 77 52 48 294 3607 27 223 45 30 34 306 3320 212 1203 1032 1038 1106 1205 1092 1155 1148 1140 1160 1126 1128 1183 1103 1165 1183 1233 1152 ]
G [ 1361 1346 1343 1425 1273 1323 1370 1359 1336 1336 1341 1378 1401 1434 1348 1342 1214 1102 2005 1782 4341 3812 688 524 290 1484 743 4586 3931 1076 594 720 1428 1410 1542 1394 1378 1334 1375 1353 1310 1325 1372 1362 1378 1336 1382 1291 1303 1345 ]
T [ 1129 1122 1149 1106 1157 1136 1099 1073 1128 1106 1226 1016 1015 1051 1097 1045 1191 1076 679 86 187 870 3824 675 23 302 33 100 796 3345 760 256 859 955 1192 1188 1110 1153 1089 1074 1107 1192 1124 1118 1103 1129 1154 1142 1117 1129 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.01 0.00 0.02 -0.01 -0.02 -0.03 -0.03 0.05 0.02 0.03 -0.01 -0.02 -0.03 -0.02 0.03 0.00 0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.00 0.00 -0.01 -0.00 -0.03 -0.00 0.04 -0.02 -0.01 -0.01 -0.01 -0.03 -0.01 0.03 -0.01 0.01 0.01 0.01 0.00 ]
G [ 0.00 0.01 0.00 0.01 0.02 0.04 0.04 0.00 -0.00 0.02 0.01 0.01 0.04 0.04 0.01 -0.00 0.01 -0.00 0.00 0.01 0.01 ]
T [ 0.00 -0.00 0.00 -0.00 -0.03 -0.01 0.01 0.04 0.01 -0.03 -0.00 -0.03 -0.01 0.02 0.03 0.01 -0.02 0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 11783

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 5285

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2642

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 783

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 739

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 452

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 445

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 220

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 200

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 187

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 173

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 139

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 106

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 71

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 69

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_18

Num. of seqlets: 63

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_20

Num. of seqlets: 46

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_22

Num. of seqlets: 34

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_25

Num. of seqlets: 24

CWM

PFM

     

HCWM

7 profiles found for the same TF (NR2C2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000982.1 NR2C2 ENCSR000EUL GM12878 Homo sapiens MA0504.2
BP000983.1 NR2C2 ENCSR000EVN HeLa-S3 Homo sapiens MA0504.2
BP000984.1 NR2C2 ENCSR000EVS HepG2 Homo sapiens MA0504.2
BP000985.1 NR2C2 ENCSR000EWH K562 Homo sapiens MA0504.2
BP000986.1 NR2C2 ENCSR454GVT WTC11 Homo sapiens MA0504.2
BP000987.1 NR2C2 ENCSR516SWI K562 Homo sapiens MA0504.2
BP000988.1 NR2C2 ENCSR559ZKI HepG2 Homo sapiens MA0504.2
Showing 7 profiles of page 1 from 1 pages
  • 1 (current)