JASPAR - ZNF24 - BP000937.1

This page shows detailed deep learning-derived predictions and motifs for ZNF24 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ZNF24
Model ID:	BP000937.1
Cell line/tissue:	HepG2
Class:	C2H2 zinc finger factors
Family:	More than 3 adjacent zinc fingers
JASPAR ID:	MA1124.1
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P17028
Source:	ENCSR791AGT
Model:	BPNet
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Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 1796

Contribution weight matrix (CWM)

A [	-0.00	0.00	0.01	0.00	-0.00	0.00	0.02	0.00	0.00	-0.00	0.02	-0.00	-0.00	0.00	0.02	-0.00	-0.00	0.00	0.01	-0.00	-0.00	0.00	0.01	0.00	-0.00	]
C [	-0.00	0.01	0.00	-0.00	-0.00	0.01	0.00	-0.00	-0.00	0.02	-0.00	-0.00	0.00	0.02	0.00	-0.00	-0.00	0.01	0.00	-0.00	0.00	0.01	0.00	-0.00	0.00	]
G [	0.00	0.00	0.00	0.00	0.00	0.00	0.00	-0.00	0.00	0.00	0.00	-0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	]
T [	0.01	-0.00	-0.00	0.01	0.01	-0.00	-0.00	0.01	0.03	-0.00	-0.00	0.02	0.03	-0.00	-0.00	0.01	0.02	-0.00	-0.00	0.01	0.01	-0.00	-0.00	0.00	0.01	]

Frequency matrix

A [	344	351	717	365	344	334	735	315	275	320	884	241	220	232	1129	168	124	159	1538	143	37	19	1723	17	6	68	1501	26	16	57	1428	201	100	281	1206	366	174	411	995	336	213	486	849	351	294	520	745	285	341	449	]
C [	395	694	378	484	361	744	355	469	358	852	314	431	262	1112	252	388	117	1439	132	231	7	1709	14	142	3	1502	116	187	23	1594	176	387	271	1124	230	394	358	921	245	409	375	728	301	389	369	686	319	482	337	687	]
G [	274	277	311	285	275	240	295	223	282	226	254	228	263	180	236	151	188	121	84	74	53	21	51	22	10	46	138	46	26	52	95	157	132	129	158	203	142	156	205	235	183	209	235	246	274	238	297	264	337	286	]
T [	783	474	390	662	816	478	411	789	881	398	344	896	1051	272	179	1089	1367	77	42	1348	1699	47	8	1615	1777	180	41	1537	1731	93	97	1051	1293	262	202	833	1122	308	351	816	1025	373	411	810	859	352	435	765	781	374	]

Hypothetical CWM

A [	-0.00	-0.00	0.00	-0.00	-0.01	-0.00	0.01	-0.01	-0.01	0.00	0.02	-0.01	-0.01	-0.00	0.02	-0.01	-0.02	-0.00	0.02	-0.01	-0.02	-0.00	0.01	-0.01	-0.01	-0.00	0.01	-0.00	-0.01	-0.00	0.00	-0.00	-0.01	]
C [	-0.01	0.00	-0.00	-0.00	-0.01	0.01	-0.00	-0.00	-0.02	0.01	-0.01	-0.01	-0.02	0.02	-0.01	-0.01	-0.02	0.02	-0.01	-0.01	-0.02	0.02	-0.00	-0.00	-0.01	0.01	-0.00	-0.00	-0.01	0.00	-0.00	-0.00	-0.00	]
G [	0.00	-0.00	-0.00	-0.00	0.00	-0.01	-0.00	-0.00	0.00	-0.01	0.00	-0.01	-0.00	-0.01	0.00	-0.01	-0.00	-0.01	0.00	-0.01	-0.00	-0.01	-0.00	-0.00	-0.00	-0.01	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	]
T [	0.00	-0.01	-0.01	0.00	0.01	-0.01	-0.01	0.01	0.02	-0.01	-0.02	0.01	0.03	-0.01	-0.02	0.02	0.03	-0.01	-0.02	0.02	0.03	-0.01	-0.02	0.01	0.02	-0.01	-0.01	0.00	0.01	-0.01	-0.01	0.00	0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 220

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 114

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 64

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 59

CWM

PFM

HCWM

8 profiles found for the same TF (ZNF24) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000930.1	ZNF24	ENCSR072PWP	GM12878	Homo sapiens	MA1124.1
BP000931.1	ZNF24	ENCSR099NCH	K562	Homo sapiens	MA1124.1
BP000932.1	ZNF24	ENCSR117WTM	K562	Homo sapiens	MA1124.1
BP000933.1	ZNF24	ENCSR362NWP	HepG2	Homo sapiens	MA1124.1
BP000934.1	ZNF24	ENCSR385AHH	K562	Homo sapiens	MA1124.1
BP000935.1	ZNF24	ENCSR503VTG	MCF-7	Homo sapiens	MA1124.1
BP000936.1	ZNF24	ENCSR695EQB	K562	Homo sapiens	MA1124.1
BP000938.1	ZNF24	ENCSR984MDV	HEK293	Homo sapiens	MA1124.1