JASPAR - ZNF24 - BP000938.1

This page shows detailed deep learning-derived predictions and motifs for ZNF24 in HEK293 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ZNF24
Model ID:	BP000938.1
Cell line/tissue:	HEK293
Class:	C2H2 zinc finger factors
Family:	More than 3 adjacent zinc fingers
JASPAR ID:	MA1124.1
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P17028
Source:	ENCSR984MDV
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_2

Number of seqlets: 1175

Contribution weight matrix (CWM)

A [	-0.00	0.00	0.01	-0.00	-0.00	0.00	0.02	0.00	-0.00	0.00	0.02	0.00	-0.00	0.00	0.02	0.00	-0.00	0.00	0.02	0.00	-0.00	0.00	0.01	-0.00	-0.00	0.00	0.01	0.00	-0.00	-0.00	]
C [	0.00	0.01	0.00	-0.00	0.00	0.01	0.00	-0.00	-0.00	0.02	0.00	-0.00	-0.00	0.02	-0.00	-0.00	-0.00	0.02	0.00	-0.00	-0.00	0.02	0.00	-0.00	0.00	0.01	0.00	-0.00	0.00	0.01	]
G [	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	-0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	]
T [	0.01	-0.00	-0.00	0.01	0.01	-0.00	-0.00	0.01	0.02	-0.00	-0.00	0.01	0.03	-0.00	-0.00	0.02	0.03	-0.00	-0.00	0.01	0.03	-0.00	-0.00	0.01	0.02	-0.00	-0.00	0.00	0.01	-0.00	]

Frequency matrix

A [	474	222	191	221	542	184	185	193	627	158	109	100	858	97	53	68	1001	51	6	26	1122	22	1	14	1120	11	4	19	1105	5	6	21	1023	57	32	82	908	150	69	196	766	230	130	314	615	247	191	355	516	218	]
C [	239	287	239	480	194	268	214	582	195	223	164	822	106	187	82	980	58	135	16	1084	22	96	7	1134	18	96	4	1115	19	104	18	1093	51	165	76	926	75	212	199	742	129	200	295	520	160	237	236	424	203	238	]
G [	209	166	184	182	197	161	161	137	173	113	139	88	129	71	66	58	70	41	23	42	28	23	7	7	31	14	7	17	40	14	15	8	65	53	34	47	105	98	81	79	114	160	97	122	150	175	160	181	170	182	]
T [	253	500	561	292	242	562	615	263	180	681	763	165	82	820	974	69	46	948	1130	23	3	1034	1160	20	6	1054	1160	24	11	1052	1136	53	36	900	1033	120	87	715	826	158	166	585	653	219	250	516	588	215	286	537	]

Hypothetical CWM

A [	-0.00	0.00	0.01	-0.00	-0.01	0.00	0.01	-0.00	-0.01	0.01	0.02	-0.00	-0.01	0.01	0.02	-0.00	-0.01	0.01	0.02	-0.00	-0.01	0.01	0.02	-0.00	-0.01	0.01	0.01	-0.00	-0.01	0.00	0.01	-0.00	-0.00	0.00	0.00	]
C [	-0.00	0.01	0.00	0.00	-0.00	0.01	0.00	0.00	-0.01	0.01	0.00	0.00	-0.01	0.02	-0.00	0.00	-0.01	0.02	-0.00	0.00	-0.01	0.02	-0.00	0.00	-0.01	0.02	-0.00	0.00	-0.00	0.01	0.00	0.00	-0.00	0.01	0.00	]
G [	0.01	0.00	0.01	0.00	0.01	0.00	0.01	0.00	0.01	0.00	0.01	0.00	0.01	-0.00	0.01	0.00	0.01	-0.01	0.01	0.00	0.01	-0.01	0.01	0.00	0.01	-0.01	0.01	0.00	0.00	-0.00	0.01	0.00	0.00	-0.00	0.01	]
T [	0.00	-0.00	-0.01	0.00	0.01	-0.01	-0.01	0.01	0.02	-0.01	-0.01	0.01	0.02	-0.01	-0.02	0.02	0.03	-0.01	-0.02	0.02	0.03	-0.01	-0.02	0.02	0.03	-0.01	-0.01	0.01	0.02	-0.00	-0.01	0.01	0.01	-0.00	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 3381

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3264

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 353

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 294

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 213

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 123

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 116

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 115

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 86

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 59

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 33

CWM

PFM

HCWM

8 profiles found for the same TF (ZNF24) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000930.1	ZNF24	ENCSR072PWP	GM12878	Homo sapiens	MA1124.1
BP000931.1	ZNF24	ENCSR099NCH	K562	Homo sapiens	MA1124.1
BP000932.1	ZNF24	ENCSR117WTM	K562	Homo sapiens	MA1124.1
BP000933.1	ZNF24	ENCSR362NWP	HepG2	Homo sapiens	MA1124.1
BP000934.1	ZNF24	ENCSR385AHH	K562	Homo sapiens	MA1124.1
BP000935.1	ZNF24	ENCSR503VTG	MCF-7	Homo sapiens	MA1124.1
BP000936.1	ZNF24	ENCSR695EQB	K562	Homo sapiens	MA1124.1
BP000937.1	ZNF24	ENCSR791AGT	HepG2	Homo sapiens	MA1124.1