JASPAR - ZNF24 - BP000936.1

This page shows detailed deep learning-derived predictions and motifs for ZNF24 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ZNF24
Model ID:	BP000936.1
Cell line/tissue:	K562
Class:	C2H2 zinc finger factors
Family:	More than 3 adjacent zinc fingers
JASPAR ID:	MA1124.1
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P17028
Source:	ENCSR695EQB
Model:	BPNet
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Sequence logo

Motif name: counts.pos_patterns.pattern_1

Number of seqlets: 4010

Contribution weight matrix (CWM)

A [	0.01	0.01	-0.00	-0.00	0.02	0.02	-0.00	-0.00	0.05	0.03	-0.00	-0.00	0.07	0.04	-0.00	-0.00	0.07	0.05	-0.00	-0.00	0.07	0.04	-0.00	-0.00	0.06	0.03	-0.00	-0.00	0.04	0.02	-0.00	-0.00	0.01	]
C [	-0.00	0.00	0.00	0.00	-0.00	0.00	0.00	-0.00	-0.00	0.00	0.00	-0.00	0.00	-0.00	0.00	-0.00	0.00	-0.00	0.00	-0.00	-0.00	-0.00	0.00	-0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	]
G [	0.00	0.00	0.00	0.02	0.00	0.00	0.00	0.04	0.00	0.00	0.00	0.05	-0.00	0.00	0.00	0.07	-0.00	0.00	0.00	0.07	-0.00	0.00	0.00	0.05	-0.00	0.00	0.00	0.04	-0.00	0.00	0.00	0.02	-0.00	]
T [	-0.00	-0.00	0.01	-0.00	-0.00	-0.00	0.02	0.00	-0.00	-0.00	0.03	0.00	-0.00	-0.00	0.05	0.00	0.00	-0.00	0.05	0.00	-0.00	0.00	0.05	0.00	-0.00	0.00	0.04	0.00	-0.00	0.00	0.02	0.00	-0.00	]

Frequency matrix

A [	1812	1147	889	1987	1722	901	826	2267	1949	552	757	2737	2458	274	340	3654	3266	136	320	3864	3433	86	74	3937	3543	31	75	3940	3481	26	180	3842	3325	115	180	3357	2737	443	621	2384	2128	834	1143	1889	1767	952	1148	1646	1537	987	]
C [	594	594	540	472	584	484	415	352	480	441	238	215	367	237	75	83	130	237	43	44	77	145	6	26	58	128	19	11	66	169	43	68	122	175	128	250	270	397	353	445	484	633	551	609	600	711	647	638	697	732	]
G [	770	732	1262	957	772	559	1668	903	702	373	2332	749	672	248	3437	179	479	212	3579	67	467	136	3903	30	374	86	3876	29	412	119	3706	60	423	215	3517	221	618	496	2484	641	819	662	1611	715	878	739	1381	876	906	843	]
T [	834	1537	1319	594	932	2066	1101	488	879	2644	683	309	513	3251	158	94	135	3425	68	35	33	3643	27	17	35	3765	40	30	51	3696	81	40	140	3505	185	182	385	2674	552	540	579	1881	705	797	765	1608	834	850	870	1448	]

Hypothetical CWM

A [	0.01	0.01	-0.01	-0.00	0.03	0.02	-0.02	-0.01	0.05	0.04	-0.03	-0.01	0.07	0.05	-0.04	-0.02	0.08	0.05	-0.04	-0.02	0.07	0.05	-0.04	-0.02	0.06	0.04	-0.03	-0.02	0.04	0.02	-0.02	-0.01	0.02	0.01	-0.01	-0.01	]
C [	0.00	0.00	0.01	-0.01	0.00	0.00	0.01	-0.02	0.00	-0.00	0.01	-0.03	0.00	-0.00	0.01	-0.04	0.01	-0.00	0.01	-0.03	0.01	0.00	0.01	-0.03	0.01	0.00	0.01	-0.02	0.01	0.01	0.01	-0.00	0.01	0.01	0.01	0.00	]
G [	0.00	0.01	0.01	0.03	-0.01	0.01	0.01	0.05	-0.02	0.01	0.01	0.06	-0.03	0.01	0.01	0.07	-0.04	0.01	0.01	0.07	-0.04	0.01	0.01	0.06	-0.03	0.01	0.01	0.04	-0.02	0.00	0.01	0.02	-0.01	0.01	0.01	0.01	]
T [	-0.01	-0.01	0.01	-0.00	-0.01	-0.01	0.02	0.00	-0.02	-0.02	0.04	0.01	-0.02	-0.02	0.05	0.01	-0.03	-0.02	0.06	0.01	-0.03	-0.02	0.05	0.02	-0.02	-0.02	0.04	0.01	-0.02	-0.01	0.02	0.01	-0.01	-0.00	0.01	0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 7046

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2664

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1698

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1001

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 512

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 379

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 327

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 154

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 61

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_19

Num. of seqlets: 27

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_20

Num. of seqlets: 21

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_21

Num. of seqlets: 21

CWM

PFM

HCWM

8 profiles found for the same TF (ZNF24) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000930.1	ZNF24	ENCSR072PWP	GM12878	Homo sapiens	MA1124.1
BP000931.1	ZNF24	ENCSR099NCH	K562	Homo sapiens	MA1124.1
BP000932.1	ZNF24	ENCSR117WTM	K562	Homo sapiens	MA1124.1
BP000933.1	ZNF24	ENCSR362NWP	HepG2	Homo sapiens	MA1124.1
BP000934.1	ZNF24	ENCSR385AHH	K562	Homo sapiens	MA1124.1
BP000935.1	ZNF24	ENCSR503VTG	MCF-7	Homo sapiens	MA1124.1
BP000937.1	ZNF24	ENCSR791AGT	HepG2	Homo sapiens	MA1124.1
BP000938.1	ZNF24	ENCSR984MDV	HEK293	Homo sapiens	MA1124.1