JASPAR - ZNF24 - BP000932.1

This page shows detailed deep learning-derived predictions and motifs for ZNF24 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ZNF24
Model ID:	BP000932.1
Cell line/tissue:	K562
Class:	C2H2 zinc finger factors
Family:	More than 3 adjacent zinc fingers
JASPAR ID:	MA1124.1
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P17028
Source:	ENCSR117WTM
Model:	BPNet
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Sequence logo

Motif name: counts.pos_patterns.pattern_1

Number of seqlets: 3588

Contribution weight matrix (CWM)

A [	-0.00	0.01	0.01	0.00	-0.00	0.03	0.02	-0.00	-0.00	0.04	0.03	-0.00	-0.00	0.05	0.03	-0.00	-0.00	0.05	0.03	-0.00	-0.00	0.03	0.02	-0.00	-0.00	0.02	0.01	-0.00	-0.00	0.01	]
C [	0.00	0.00	0.00	-0.00	-0.00	0.00	0.00	0.00	-0.00	0.00	-0.00	0.00	-0.00	0.00	-0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	]
G [	0.01	0.00	0.00	0.00	0.03	0.00	0.00	0.00	0.04	-0.00	0.00	0.00	0.05	-0.00	0.00	-0.00	0.05	-0.00	-0.00	0.00	0.04	-0.00	-0.00	0.00	0.02	-0.00	-0.00	0.00	0.01	-0.00	]
T [	-0.00	-0.00	-0.00	0.01	-0.00	-0.00	-0.00	0.02	0.00	-0.00	-0.00	0.03	0.00	-0.00	-0.00	0.04	0.00	-0.00	0.00	0.03	0.00	-0.00	0.00	0.02	0.00	-0.00	0.00	0.01	0.00	-0.00	]

Frequency matrix

A [	1493	1596	944	736	1657	1627	893	683	1937	1740	626	648	2233	2004	363	325	2881	2619	178	219	3432	3186	78	69	3541	3254	21	37	3499	3095	53	137	3205	2749	207	260	2642	2307	500	588	2082	1902	699	896	1752	1611	864	972	1550	1470	]
C [	660	525	532	517	488	530	441	402	331	464	407	273	251	358	230	109	159	208	178	34	63	50	115	11	26	45	80	21	49	91	139	46	162	158	261	187	319	320	422	336	436	422	554	462	498	517	618	533	559	565	]
G [	760	777	785	1250	889	718	621	1500	910	677	535	1931	801	699	438	2845	408	535	386	3256	64	324	242	3477	15	270	193	3490	22	342	247	3343	148	483	444	2853	384	595	591	2177	618	741	719	1645	692	838	712	1374	791	871	]
T [	675	690	1327	1085	554	713	1633	1003	410	707	2020	736	303	527	2557	309	140	226	2846	79	29	28	3153	31	6	19	3294	40	18	60	3149	62	73	198	2676	288	243	366	2075	487	452	523	1616	585	646	622	1394	709	688	682	]

Hypothetical CWM

A [	-0.01	0.01	0.01	-0.01	-0.01	0.03	0.02	-0.01	-0.01	0.04	0.03	-0.02	-0.02	0.05	0.03	-0.03	-0.02	0.05	0.03	-0.02	-0.02	0.04	0.02	-0.02	-0.02	0.02	0.01	-0.01	-0.01	0.01	0.00	-0.01	-0.01	]
C [	-0.01	0.00	0.00	0.00	-0.01	0.00	-0.00	0.00	-0.02	0.00	-0.01	0.01	-0.03	0.00	-0.01	0.01	-0.03	0.00	-0.00	0.01	-0.02	0.01	0.00	0.00	-0.01	0.01	0.00	0.00	-0.00	0.01	0.00	0.00	-0.00	]
G [	0.02	-0.00	0.01	0.00	0.03	-0.01	0.01	0.00	0.04	-0.02	0.01	-0.00	0.05	-0.03	0.01	-0.00	0.05	-0.03	0.00	-0.00	0.04	-0.02	0.00	-0.00	0.03	-0.01	0.00	0.00	0.02	-0.01	0.00	0.00	0.01	]
T [	-0.00	-0.01	-0.01	0.01	0.00	-0.01	-0.01	0.02	0.00	-0.02	-0.02	0.03	0.01	-0.02	-0.02	0.04	0.01	-0.02	-0.01	0.03	0.01	-0.01	-0.01	0.02	0.01	-0.01	-0.01	0.01	0.00	-0.01	-0.00	0.00	0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 3874

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3370

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1533

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 599

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 393

CWM

PFM

HCWM

Motif name: counts.neg_patterns.pattern_0

Num. of seqlets: 358

CWM

PFM

HCWM

Motif name: counts.neg_patterns.pattern_2

Num. of seqlets: 149

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 68

CWM

PFM

HCWM

8 profiles found for the same TF (ZNF24) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000930.1	ZNF24	ENCSR072PWP	GM12878	Homo sapiens	MA1124.1
BP000931.1	ZNF24	ENCSR099NCH	K562	Homo sapiens	MA1124.1
BP000933.1	ZNF24	ENCSR362NWP	HepG2	Homo sapiens	MA1124.1
BP000934.1	ZNF24	ENCSR385AHH	K562	Homo sapiens	MA1124.1
BP000935.1	ZNF24	ENCSR503VTG	MCF-7	Homo sapiens	MA1124.1
BP000936.1	ZNF24	ENCSR695EQB	K562	Homo sapiens	MA1124.1
BP000937.1	ZNF24	ENCSR791AGT	HepG2	Homo sapiens	MA1124.1
BP000938.1	ZNF24	ENCSR984MDV	HEK293	Homo sapiens	MA1124.1