JASPAR - ZNF24 - BP000931.1

This page shows detailed deep learning-derived predictions and motifs for ZNF24 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ZNF24
Model ID:	BP000931.1
Cell line/tissue:	K562
Class:	C2H2 zinc finger factors
Family:	More than 3 adjacent zinc fingers
JASPAR ID:	MA1124.1
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P17028
Source:	ENCSR099NCH
Model:	BPNet
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Sequence logo

Motif name: counts.pos_patterns.pattern_1

Number of seqlets: 4199

Contribution weight matrix (CWM)

A [	-0.00	0.03	0.02	-0.00	-0.00	0.06	0.05	-0.00	-0.00	0.09	0.06	-0.00	-0.00	0.10	0.06	-0.00	-0.00	0.09	0.05	-0.00	-0.00	0.07	0.04	-0.00	-0.00	0.04	0.02	-0.00	-0.00	0.02	]
C [	-0.00	0.00	0.00	0.00	-0.00	-0.00	0.00	0.00	-0.00	0.00	-0.00	0.00	-0.00	-0.00	-0.00	0.00	-0.00	0.00	-0.00	0.00	-0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	]
G [	0.02	0.00	0.00	0.00	0.05	0.00	0.00	0.00	0.07	-0.00	-0.00	0.00	0.09	-0.00	-0.00	0.00	0.09	-0.00	-0.00	0.00	0.07	-0.00	-0.00	0.00	0.05	-0.00	-0.00	0.00	0.02	-0.00	]
T [	-0.00	-0.00	-0.00	0.02	0.00	0.00	-0.00	0.05	0.00	-0.00	-0.00	0.07	0.00	-0.00	0.00	0.07	0.00	-0.00	-0.00	0.07	0.00	-0.00	0.00	0.05	0.00	-0.00	0.00	0.02	0.00	-0.00	]

Frequency matrix

A [	1927	1255	895	2029	1838	1020	862	2284	1973	587	730	2969	2679	228	298	3953	3635	46	334	4103	3762	22	51	4084	3754	45	78	4115	3718	22	263	4072	3602	63	156	3590	2965	460	672	2489	2222	854	1133	1966	1872	1058	1205	1709	1635	1002	]
C [	615	597	610	525	615	533	458	369	525	403	247	237	354	222	59	56	107	189	36	40	56	60	11	46	53	110	28	29	52	211	46	61	95	117	96	226	256	428	382	522	504	675	580	645	625	729	681	720	717	799	]
G [	794	775	1237	970	737	572	1530	1042	661	399	2436	732	633	223	3702	138	338	125	3748	37	351	69	4120	47	352	92	4044	37	398	102	3815	43	400	126	3786	237	602	493	2521	663	848	635	1671	764	872	738	1444	901	944	848	]
T [	863	1572	1457	675	1009	2074	1349	504	1040	2810	786	261	533	3526	140	52	119	3839	81	19	30	4048	17	22	40	3952	49	18	31	3864	75	23	102	3893	161	146	376	2818	624	525	625	2035	815	824	830	1674	869	869	903	1550	]

Hypothetical CWM

A [	-0.01	-0.00	0.03	0.03	-0.02	-0.01	0.06	0.05	-0.04	-0.01	0.09	0.06	-0.06	-0.03	0.10	0.06	-0.06	-0.03	0.09	0.06	-0.05	-0.03	0.07	0.04	-0.04	-0.02	0.04	0.02	-0.02	-0.02	0.02	0.01	-0.01	-0.01	]
C [	0.01	-0.01	0.00	0.00	0.01	-0.03	0.01	-0.00	0.02	-0.04	0.01	-0.00	0.01	-0.05	0.01	-0.00	0.01	-0.04	0.01	-0.00	0.01	-0.03	0.01	0.00	0.01	-0.02	0.02	0.01	0.00	-0.00	0.01	0.01	0.01	0.00	]
G [	0.01	0.03	-0.01	0.01	0.01	0.06	-0.03	0.00	0.01	0.07	-0.05	0.00	0.01	0.09	-0.05	0.00	0.01	0.09	-0.05	0.00	0.01	0.07	-0.04	0.00	0.01	0.06	-0.02	0.00	0.01	0.03	-0.01	0.00	0.01	0.01	]
T [	0.01	-0.00	-0.01	-0.01	0.03	0.00	-0.02	-0.02	0.05	0.01	-0.03	-0.03	0.07	0.01	-0.03	-0.02	0.08	0.02	-0.03	-0.02	0.07	0.02	-0.03	-0.02	0.05	0.02	-0.02	-0.00	0.03	0.01	-0.01	-0.00	0.01	0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 8622

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1248

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 601

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 207

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 116

CWM

PFM

HCWM

8 profiles found for the same TF (ZNF24) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000930.1	ZNF24	ENCSR072PWP	GM12878	Homo sapiens	MA1124.1
BP000932.1	ZNF24	ENCSR117WTM	K562	Homo sapiens	MA1124.1
BP000933.1	ZNF24	ENCSR362NWP	HepG2	Homo sapiens	MA1124.1
BP000934.1	ZNF24	ENCSR385AHH	K562	Homo sapiens	MA1124.1
BP000935.1	ZNF24	ENCSR503VTG	MCF-7	Homo sapiens	MA1124.1
BP000936.1	ZNF24	ENCSR695EQB	K562	Homo sapiens	MA1124.1
BP000937.1	ZNF24	ENCSR791AGT	HepG2	Homo sapiens	MA1124.1
BP000938.1	ZNF24	ENCSR984MDV	HEK293	Homo sapiens	MA1124.1