JASPAR - ZNF24 - BP000935.1

This page shows detailed deep learning-derived predictions and motifs for ZNF24 in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ZNF24
Model ID:	BP000935.1
Cell line/tissue:	MCF-7
Class:	C2H2 zinc finger factors
Family:	More than 3 adjacent zinc fingers
JASPAR ID:	MA1124.1
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P17028
Source:	ENCSR503VTG
Model:	BPNet
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Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 2362

Contribution weight matrix (CWM)

A [	0.01	-0.00	-0.00	0.00	0.01	-0.00	-0.00	0.00	0.03	0.00	-0.00	0.00	0.04	0.00	-0.00	0.00	0.04	-0.00	-0.00	0.00	0.03	-0.00	-0.00	0.00	0.02	-0.00	-0.00	0.00	0.01	-0.00	-0.00	0.00	]
C [	0.00	-0.00	-0.00	0.01	0.00	-0.00	-0.00	0.02	0.00	-0.00	-0.00	0.03	-0.00	-0.00	-0.00	0.04	-0.00	-0.00	-0.00	0.03	0.00	-0.00	-0.00	0.03	0.00	-0.00	0.00	0.02	0.00	-0.00	0.00	0.01	]
G [	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	-0.00	-0.00	0.00	0.00	0.00	-0.00	-0.00	0.00	0.00	0.00	-0.00	0.00	0.00	0.00	-0.00	0.00	0.00	0.00	0.00	]
T [	-0.00	0.00	0.01	-0.00	-0.00	0.01	0.03	-0.00	-0.00	0.02	0.04	-0.00	-0.00	0.02	0.05	-0.00	-0.00	0.03	0.05	-0.00	-0.00	0.02	0.04	-0.00	-0.00	0.01	0.02	-0.00	-0.00	0.01	0.01	-0.00	]

Frequency matrix

A [	511	933	466	451	494	1063	416	358	379	1289	262	207	266	1731	141	75	144	2061	77	16	32	2245	29	8	39	2271	20	4	37	2168	52	12	61	2022	184	66	267	1839	389	165	512	1464	475	267	679	1169	485	353	729	960	]
C [	873	459	554	468	940	397	527	419	1185	365	470	284	1612	225	402	139	1977	115	285	23	2223	44	211	19	2242	40	227	13	2208	84	260	40	2134	132	338	257	1788	166	460	461	1306	270	432	550	1011	358	480	489	845	431	]
G [	381	439	399	378	355	405	289	351	285	354	262	250	172	241	131	102	106	131	58	36	47	66	41	18	18	41	31	16	23	82	42	32	33	119	126	91	71	177	199	153	154	230	256	217	252	290	311	346	334	357	]
T [	597	531	943	1065	573	497	1130	1234	513	354	1368	1621	312	165	1688	2046	135	55	1942	2287	60	7	2081	2317	63	10	2084	2329	94	28	2008	2278	134	89	1714	1948	236	180	1314	1583	390	398	1199	1328	420	545	1086	1174	454	614	]

Hypothetical CWM

A [	-0.01	0.00	0.01	-0.00	-0.01	0.01	0.02	-0.01	-0.01	0.01	0.03	-0.01	-0.02	0.01	0.04	-0.01	-0.02	0.01	0.04	-0.02	-0.02	0.01	0.03	-0.01	-0.02	0.00	0.02	-0.01	-0.02	0.00	0.01	-0.01	-0.01	0.00	0.01	-0.01	-0.01	]
C [	-0.00	0.01	0.00	0.00	-0.01	0.01	0.00	-0.00	-0.01	0.02	-0.00	-0.00	-0.02	0.03	-0.00	-0.00	-0.03	0.04	-0.00	-0.00	-0.02	0.04	-0.00	-0.00	-0.02	0.03	0.00	0.00	-0.01	0.02	0.00	0.00	-0.00	0.01	0.00	0.00	-0.00	]
G [	0.00	-0.00	0.01	0.00	0.01	-0.00	0.01	0.00	0.00	-0.01	0.01	0.00	0.00	-0.02	0.01	0.00	-0.00	-0.03	0.01	-0.00	-0.00	-0.02	0.01	0.00	0.00	-0.02	0.01	0.00	0.00	-0.01	0.00	0.00	0.00	-0.00	0.00	0.00	0.00	]
T [	0.01	-0.01	-0.01	0.01	0.01	-0.01	-0.02	0.01	0.03	-0.01	-0.03	0.02	0.04	-0.02	-0.03	0.03	0.05	-0.01	-0.04	0.03	0.05	-0.01	-0.03	0.02	0.04	-0.01	-0.02	0.02	0.03	-0.01	-0.01	0.01	0.02	-0.01	-0.01	0.00	0.01	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1815

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1582

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1033

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1025

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 341

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 289

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 193

CWM

PFM

HCWM

8 profiles found for the same TF (ZNF24) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000930.1	ZNF24	ENCSR072PWP	GM12878	Homo sapiens	MA1124.1
BP000931.1	ZNF24	ENCSR099NCH	K562	Homo sapiens	MA1124.1
BP000932.1	ZNF24	ENCSR117WTM	K562	Homo sapiens	MA1124.1
BP000933.1	ZNF24	ENCSR362NWP	HepG2	Homo sapiens	MA1124.1
BP000934.1	ZNF24	ENCSR385AHH	K562	Homo sapiens	MA1124.1
BP000936.1	ZNF24	ENCSR695EQB	K562	Homo sapiens	MA1124.1
BP000937.1	ZNF24	ENCSR791AGT	HepG2	Homo sapiens	MA1124.1
BP000938.1	ZNF24	ENCSR984MDV	HEK293	Homo sapiens	MA1124.1