Detailed information of deep learning profile BP000933.1

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This page shows detailed deep learning-derived predictions and motifs for ZNF24 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZNF24
Model ID: BP000933.1
Cell line/tissue: HepG2
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA1124.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17028  
Source: ENCSR362NWP
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.01 0.01 -0.00 -0.00 0.02 0.01 -0.00 -0.00 0.03 0.02 -0.00 -0.00 0.05 0.02 -0.00 0.00 0.05 0.02 -0.00 -0.00 0.03 0.01 -0.00 -0.00 0.02 0.00 -0.00 -0.00 0.01 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 -0.00 0.00 0.01 0.00 -0.00 0.00 0.02 0.00 -0.00 0.00 0.03 0.00 -0.00 -0.00 0.03 -0.00 -0.00 -0.00 0.03 -0.00 -0.00 0.00 0.01 -0.00 -0.00 0.00 0.01 -0.00 ]
T [ -0.00 0.00 0.01 0.00 -0.00 0.00 0.02 0.00 -0.00 0.00 0.03 0.00 0.00 0.00 0.03 0.00 0.00 0.00 0.03 0.00 -0.00 0.00 0.02 0.00 -0.00 0.00 0.01 0.00 -0.00 ]

Frequency matrix

       
A [ 767 427 341 815 827 430 324 986 918 362 276 1142 942 216 213 1253 1089 89 109 1568 1410 41 105 1723 1574 13 73 1709 1522 23 65 1556 1283 97 153 1229 1043 258 363 897 865 384 465 809 712 400 489 730 666 405 ]
C [ 270 306 256 302 242 257 204 201 213 206 144 123 187 181 119 115 134 105 40 41 63 102 43 7 22 73 31 18 44 79 52 87 110 163 137 205 210 268 208 309 242 289 259 282 271 366 287 284 291 345 ]
G [ 394 327 617 314 362 258 702 341 290 236 863 319 257 169 1069 282 250 133 1469 110 179 88 1545 10 124 26 1628 6 125 34 1590 52 227 144 1285 166 294 231 921 290 356 325 690 306 400 345 573 387 432 362 ]
T [ 321 692 538 321 321 807 522 224 331 948 469 168 366 1186 351 102 279 1425 134 33 100 1521 59 12 32 1640 20 19 61 1616 45 57 132 1348 177 152 205 995 260 256 289 754 338 355 369 641 403 351 363 640 ]

Hypothetical CWM

   
A [ 0.01 0.01 -0.01 -0.01 0.02 0.01 -0.02 -0.01 0.04 0.02 -0.03 -0.01 0.05 0.03 -0.04 -0.01 0.05 0.02 -0.03 -0.01 0.03 0.01 -0.02 -0.01 0.02 0.00 -0.01 -0.00 0.01 ]
C [ 0.00 0.00 0.01 -0.00 0.00 -0.00 0.01 -0.01 -0.00 -0.01 0.01 -0.01 -0.00 -0.01 0.02 -0.01 -0.00 -0.01 0.01 -0.00 0.00 0.00 0.01 0.00 0.01 0.01 0.00 0.00 0.01 ]
G [ -0.00 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 0.02 -0.01 -0.01 -0.01 0.03 -0.02 -0.01 -0.01 0.03 -0.02 -0.01 -0.01 0.03 -0.01 -0.01 -0.00 0.02 -0.01 -0.00 0.00 0.01 -0.00 ]
T [ -0.01 0.00 0.01 0.00 -0.01 0.00 0.02 -0.00 -0.02 -0.00 0.03 -0.00 -0.02 -0.00 0.04 -0.00 -0.02 0.00 0.03 -0.00 -0.02 0.00 0.02 -0.00 -0.01 0.00 0.01 -0.00 -0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 405

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 216

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 184

CWM

PFM

     

HCWM

8 profiles found for the same TF (ZNF24) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000930.1 ZNF24 ENCSR072PWP GM12878 Homo sapiens MA1124.1
BP000931.1 ZNF24 ENCSR099NCH K562 Homo sapiens MA1124.1
BP000932.1 ZNF24 ENCSR117WTM K562 Homo sapiens MA1124.1
BP000934.1 ZNF24 ENCSR385AHH K562 Homo sapiens MA1124.1
BP000935.1 ZNF24 ENCSR503VTG MCF-7 Homo sapiens MA1124.1
BP000936.1 ZNF24 ENCSR695EQB K562 Homo sapiens MA1124.1
BP000937.1 ZNF24 ENCSR791AGT HepG2 Homo sapiens MA1124.1
BP000938.1 ZNF24 ENCSR984MDV HEK293 Homo sapiens MA1124.1
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