JASPAR - ZNF24 - BP000937.1

This page shows detailed deep learning-derived predictions and motifs for ZNF24 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ZNF24
Model ID:	BP000937.1
Cell line/tissue:	HepG2
Class:	C2H2 zinc finger factors
Family:	More than 3 adjacent zinc fingers
JASPAR ID:	MA1124.1
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P17028
Source:	ENCSR791AGT
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 1796

Contribution weight matrix (CWM)

A [	0.01	0.00	-0.00	-0.00	0.01	0.01	-0.00	-0.00	0.02	0.01	-0.00	-0.00	0.03	0.02	-0.00	-0.00	0.03	0.01	-0.00	-0.00	0.01	0.01	-0.00	-0.00	0.01	]
C [	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	-0.00	0.00	0.00	0.00	-0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	]
G [	0.00	-0.00	0.00	0.01	0.00	-0.00	0.00	0.01	-0.00	-0.00	0.00	0.02	0.00	-0.00	-0.00	0.02	-0.00	-0.00	0.00	0.01	-0.00	-0.00	0.00	0.01	-0.00	]
T [	-0.00	0.00	0.01	0.00	-0.00	-0.00	0.01	0.00	-0.00	-0.00	0.02	0.00	-0.00	-0.00	0.02	-0.00	0.00	0.00	0.02	0.00	-0.00	0.00	0.01	0.00	-0.00	]

Frequency matrix

A [	374	781	765	435	352	859	810	411	373	1025	816	351	308	1122	833	202	262	1293	1051	97	93	1731	1537	41	180	1777	1615	8	47	1699	1348	42	77	1367	1089	179	272	1051	896	344	398	881	789	411	478	816	662	390	474	783	]
C [	286	337	264	297	238	274	246	235	209	183	235	205	156	142	203	158	129	132	157	95	52	26	46	138	46	10	22	51	21	53	74	84	121	188	151	236	180	263	228	254	226	282	223	295	240	275	285	311	277	274	]
G [	687	337	482	319	686	369	389	301	728	375	409	245	921	358	394	230	1124	271	387	176	1594	23	187	116	1502	3	142	14	1709	7	231	132	1439	117	388	252	1112	262	431	314	852	358	469	355	744	361	484	378	694	395	]
T [	449	341	285	745	520	294	351	849	486	213	336	995	411	174	366	1206	281	100	201	1428	57	16	26	1501	68	6	17	1723	19	37	143	1538	159	124	168	1129	232	220	241	884	320	275	315	735	334	344	365	717	351	344	]

Hypothetical CWM

A [	0.00	0.00	-0.01	-0.01	0.01	0.00	-0.01	-0.01	0.02	0.01	-0.02	-0.01	0.03	0.02	-0.02	-0.01	0.03	0.02	-0.02	-0.01	0.03	0.01	-0.02	-0.01	0.02	0.01	-0.01	-0.01	0.01	0.00	-0.01	-0.01	0.00	]
C [	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.01	-0.00	-0.00	-0.00	-0.01	-0.00	-0.01	0.00	-0.01	-0.00	-0.01	0.00	-0.01	-0.00	-0.01	0.00	-0.01	0.00	-0.00	-0.00	-0.01	0.00	-0.00	-0.00	-0.00	0.00	]
G [	-0.00	-0.00	-0.00	0.00	-0.01	-0.00	-0.00	0.01	-0.01	-0.00	-0.00	0.02	-0.02	-0.01	-0.01	0.02	-0.02	-0.01	-0.01	0.02	-0.02	-0.01	-0.01	0.01	-0.02	-0.00	-0.00	0.01	-0.01	-0.00	-0.00	0.00	-0.01	]
T [	-0.01	-0.00	0.00	-0.00	-0.01	-0.00	0.01	-0.00	-0.01	-0.01	0.01	-0.00	-0.02	-0.01	0.02	-0.00	-0.02	-0.01	0.02	-0.00	-0.01	-0.01	0.02	0.00	-0.01	-0.01	0.01	-0.00	-0.01	-0.00	0.00	-0.00	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 220

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 114

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 64

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 59

CWM

PFM

HCWM

8 profiles found for the same TF (ZNF24) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000930.1	ZNF24	ENCSR072PWP	GM12878	Homo sapiens	MA1124.1
BP000931.1	ZNF24	ENCSR099NCH	K562	Homo sapiens	MA1124.1
BP000932.1	ZNF24	ENCSR117WTM	K562	Homo sapiens	MA1124.1
BP000933.1	ZNF24	ENCSR362NWP	HepG2	Homo sapiens	MA1124.1
BP000934.1	ZNF24	ENCSR385AHH	K562	Homo sapiens	MA1124.1
BP000935.1	ZNF24	ENCSR503VTG	MCF-7	Homo sapiens	MA1124.1
BP000936.1	ZNF24	ENCSR695EQB	K562	Homo sapiens	MA1124.1
BP000938.1	ZNF24	ENCSR984MDV	HEK293	Homo sapiens	MA1124.1