JASPAR - ZNF24 - BP000934.1

This page shows detailed deep learning-derived predictions and motifs for ZNF24 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ZNF24
Model ID:	BP000934.1
Cell line/tissue:	K562
Class:	C2H2 zinc finger factors
Family:	More than 3 adjacent zinc fingers
JASPAR ID:	MA1124.1
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P17028
Source:	ENCSR385AHH
Model:	BPNet
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Sequence logo

Motif name: counts.pos_patterns.pattern_1

Number of seqlets: 3085

Contribution weight matrix (CWM)

A [	-0.00	0.01	0.01	-0.00	-0.00	0.03	0.02	-0.00	-0.00	0.04	0.02	-0.00	-0.00	0.05	0.03	-0.00	-0.00	0.05	0.03	-0.00	-0.00	0.05	0.02	-0.00	-0.00	0.03	0.01	-0.00	-0.00	0.02	0.01	-0.00	-0.00	0.01	]
C [	0.00	-0.00	0.00	0.00	0.00	0.00	-0.00	0.00	-0.00	0.00	-0.00	0.00	-0.00	0.00	-0.00	0.00	-0.00	0.00	-0.00	0.00	0.00	0.00	-0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	]
G [	0.01	0.00	0.00	0.00	0.02	0.00	0.00	0.00	0.03	-0.00	-0.00	0.00	0.04	-0.00	-0.00	-0.00	0.05	-0.00	-0.00	0.00	0.04	-0.00	-0.00	0.00	0.03	-0.00	-0.00	0.00	0.02	-0.00	-0.00	0.00	0.01	-0.00	]
T [	-0.00	-0.00	-0.00	0.01	-0.00	-0.00	-0.00	0.02	0.00	-0.00	-0.00	0.03	0.00	-0.00	-0.00	0.04	0.00	-0.00	-0.00	0.04	0.00	-0.00	0.00	0.03	0.00	-0.00	0.00	0.02	0.00	-0.00	0.00	0.01	0.00	-0.00	]

Frequency matrix

A [	816	656	1504	1399	716	583	1662	1384	488	534	2024	1697	211	299	2823	2385	78	206	3011	2538	43	96	3042	2608	22	78	3036	2626	30	141	3013	2566	51	116	2836	2274	212	300	2230	1797	467	667	1614	1471	659	835	1358	1258	718	800	]
C [	483	464	428	475	389	373	288	417	315	209	192	298	219	106	64	128	159	54	24	67	98	20	21	39	91	31	18	69	136	34	28	71	132	88	88	148	242	191	285	286	412	372	459	415	531	467	489	485	561	489	]
G [	587	1029	678	585	443	1215	744	619	303	1722	652	627	234	2529	140	451	156	2763	32	434	98	2933	13	403	76	2932	20	362	74	2849	26	392	92	2795	88	488	266	2320	333	641	415	1557	490	716	505	1219	618	721	580	1104	]
T [	1199	936	475	626	1537	914	391	665	1979	620	217	463	2421	151	58	121	2692	62	18	46	2846	36	9	35	2896	44	11	28	2845	61	18	56	2810	86	73	175	2365	274	237	361	1791	489	522	483	1390	564	620	621	1226	692	]

Hypothetical CWM

A [	0.01	0.00	-0.01	-0.01	0.02	0.01	-0.02	-0.01	0.03	0.02	-0.03	-0.01	0.05	0.03	-0.04	-0.02	0.05	0.03	-0.04	-0.02	0.05	0.03	-0.04	-0.02	0.05	0.03	-0.03	-0.02	0.03	0.02	-0.02	-0.02	0.02	0.01	-0.01	-0.01	0.01	]
C [	-0.00	0.00	0.00	-0.00	-0.00	-0.00	0.00	-0.01	-0.00	-0.00	0.00	-0.02	-0.00	-0.00	0.01	-0.02	0.00	-0.00	0.01	-0.02	0.00	-0.00	0.01	-0.02	0.01	-0.00	0.01	-0.01	0.01	-0.00	0.01	-0.01	0.01	0.00	0.01	-0.00	0.01	]
G [	0.00	0.00	0.00	0.01	-0.00	0.00	0.00	0.03	-0.01	0.00	-0.00	0.04	-0.02	0.00	-0.00	0.05	-0.03	0.00	-0.00	0.05	-0.03	0.00	-0.00	0.04	-0.03	-0.00	-0.00	0.03	-0.02	-0.00	-0.00	0.02	-0.01	-0.00	0.00	0.01	-0.01	]
T [	-0.01	-0.01	0.00	-0.00	-0.01	-0.01	0.01	-0.00	-0.02	-0.01	0.02	-0.00	-0.02	-0.02	0.04	-0.00	-0.03	-0.02	0.04	0.00	-0.03	-0.02	0.04	0.01	-0.03	-0.01	0.04	0.01	-0.02	-0.01	0.02	0.00	-0.01	-0.00	0.01	0.00	-0.01	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 4895

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1754

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 908

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 887

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 695

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 454

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 68

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 29

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 23

CWM

PFM

HCWM

8 profiles found for the same TF (ZNF24) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000930.1	ZNF24	ENCSR072PWP	GM12878	Homo sapiens	MA1124.1
BP000931.1	ZNF24	ENCSR099NCH	K562	Homo sapiens	MA1124.1
BP000932.1	ZNF24	ENCSR117WTM	K562	Homo sapiens	MA1124.1
BP000933.1	ZNF24	ENCSR362NWP	HepG2	Homo sapiens	MA1124.1
BP000935.1	ZNF24	ENCSR503VTG	MCF-7	Homo sapiens	MA1124.1
BP000936.1	ZNF24	ENCSR695EQB	K562	Homo sapiens	MA1124.1
BP000937.1	ZNF24	ENCSR791AGT	HepG2	Homo sapiens	MA1124.1
BP000938.1	ZNF24	ENCSR984MDV	HEK293	Homo sapiens	MA1124.1