JASPAR - ZNF24 - BP000934.1

This page shows detailed deep learning-derived predictions and motifs for ZNF24 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ZNF24
Model ID:	BP000934.1
Cell line/tissue:	K562
Class:	C2H2 zinc finger factors
Family:	More than 3 adjacent zinc fingers
JASPAR ID:	MA1124.1
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P17028
Source:	ENCSR385AHH
Model:	BPNet
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Sequence logo

Motif name: counts.pos_patterns.pattern_1

Number of seqlets: 3085

Contribution weight matrix (CWM)

A [	-0.00	0.00	0.01	0.00	-0.00	0.00	0.02	0.00	-0.00	0.00	0.03	0.00	-0.00	0.00	0.04	-0.00	-0.00	0.00	0.04	-0.00	-0.00	0.00	0.03	-0.00	-0.00	0.00	0.02	-0.00	-0.00	-0.00	0.01	-0.00	-0.00	-0.00	]
C [	-0.00	0.01	0.00	-0.00	-0.00	0.02	0.00	-0.00	-0.00	0.03	0.00	-0.00	-0.00	0.04	0.00	-0.00	-0.00	0.05	-0.00	-0.00	-0.00	0.04	0.00	-0.00	-0.00	0.03	0.00	0.00	0.00	0.02	0.00	0.00	0.00	0.01	]
G [	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	-0.00	0.00	0.00	0.00	-0.00	0.00	-0.00	0.00	-0.00	0.00	-0.00	0.00	-0.00	0.00	-0.00	0.00	-0.00	0.00	0.00	0.00	0.00	-0.00	0.00	]
T [	0.01	-0.00	-0.00	0.01	0.02	-0.00	-0.00	0.01	0.03	-0.00	-0.00	0.02	0.05	-0.00	-0.00	0.03	0.05	-0.00	-0.00	0.03	0.05	-0.00	-0.00	0.02	0.04	-0.00	-0.00	0.02	0.03	-0.00	-0.00	0.01	0.01	-0.00	]

Frequency matrix

A [	692	1226	621	620	564	1390	483	522	489	1791	361	237	274	2365	175	73	86	2810	56	18	61	2845	28	11	44	2896	35	9	36	2846	46	18	62	2692	121	58	151	2421	463	217	620	1979	665	391	914	1537	626	475	936	1199	]
C [	1104	580	721	618	1219	505	716	490	1557	415	641	333	2320	266	488	88	2795	92	392	26	2849	74	362	20	2932	76	403	13	2933	98	434	32	2763	156	451	140	2529	234	627	652	1722	303	619	744	1215	443	585	678	1029	587	]
G [	489	561	485	489	467	531	415	459	372	412	286	285	191	242	148	88	88	132	71	28	34	136	69	18	31	91	39	21	20	98	67	24	54	159	128	64	106	219	298	192	209	315	417	288	373	389	475	428	464	483	]
T [	800	718	1258	1358	835	659	1471	1614	667	467	1797	2230	300	212	2274	2836	116	51	2566	3013	141	30	2626	3036	78	22	2608	3042	96	43	2538	3011	206	78	2385	2823	299	211	1697	2024	534	488	1384	1662	583	716	1399	1504	656	816	]

Hypothetical CWM

A [	-0.01	0.00	0.01	-0.00	-0.01	0.00	0.02	-0.01	-0.02	0.01	0.04	-0.01	-0.03	0.01	0.04	-0.02	-0.03	0.00	0.04	-0.02	-0.03	-0.00	0.04	-0.02	-0.02	-0.00	0.02	-0.01	-0.02	-0.00	0.01	-0.01	-0.01	-0.00	0.00	-0.01	-0.01	]
C [	-0.01	0.01	0.00	-0.00	-0.01	0.02	-0.00	-0.00	-0.02	0.03	-0.00	-0.00	-0.03	0.04	-0.00	0.00	-0.03	0.05	-0.00	0.00	-0.03	0.05	-0.00	0.00	-0.02	0.04	-0.00	0.00	-0.01	0.03	0.00	0.00	-0.00	0.01	0.00	0.00	0.00	]
G [	0.01	-0.00	0.01	0.00	0.01	-0.01	0.01	-0.00	0.01	-0.01	0.01	-0.00	0.01	-0.02	0.01	-0.00	0.00	-0.02	0.01	-0.00	0.00	-0.02	0.01	-0.00	-0.00	-0.02	0.00	-0.00	-0.00	-0.01	0.00	-0.00	-0.00	-0.00	0.00	0.00	-0.00	]
T [	0.01	-0.01	-0.01	0.01	0.02	-0.02	-0.02	0.02	0.03	-0.02	-0.03	0.03	0.05	-0.02	-0.04	0.03	0.05	-0.02	-0.04	0.03	0.05	-0.02	-0.04	0.03	0.05	-0.01	-0.03	0.02	0.03	-0.01	-0.02	0.01	0.02	-0.01	-0.01	0.00	0.01	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 4895

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1754

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 908

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 887

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 695

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 454

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 68

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 29

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 23

CWM

PFM

HCWM

8 profiles found for the same TF (ZNF24) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000930.1	ZNF24	ENCSR072PWP	GM12878	Homo sapiens	MA1124.1
BP000931.1	ZNF24	ENCSR099NCH	K562	Homo sapiens	MA1124.1
BP000932.1	ZNF24	ENCSR117WTM	K562	Homo sapiens	MA1124.1
BP000933.1	ZNF24	ENCSR362NWP	HepG2	Homo sapiens	MA1124.1
BP000935.1	ZNF24	ENCSR503VTG	MCF-7	Homo sapiens	MA1124.1
BP000936.1	ZNF24	ENCSR695EQB	K562	Homo sapiens	MA1124.1
BP000937.1	ZNF24	ENCSR791AGT	HepG2	Homo sapiens	MA1124.1
BP000938.1	ZNF24	ENCSR984MDV	HEK293	Homo sapiens	MA1124.1