JASPAR - ZNF24 - BP000930.1

This page shows detailed deep learning-derived predictions and motifs for ZNF24 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ZNF24
Model ID:	BP000930.1
Cell line/tissue:	GM12878
Class:	C2H2 zinc finger factors
Family:	More than 3 adjacent zinc fingers
JASPAR ID:	MA1124.1
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P17028
Source:	ENCSR072PWP
Model:	BPNet
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Sequence logo

Motif name: counts.pos_patterns.pattern_1

Number of seqlets: 3507

Contribution weight matrix (CWM)

A [	-0.00	0.00	0.01	0.00	-0.00	0.00	0.02	0.00	-0.00	0.00	0.03	0.00	-0.00	0.00	0.04	-0.00	-0.00	0.00	0.04	-0.00	-0.00	0.00	0.03	-0.00	-0.00	0.00	0.02	-0.00	-0.00	0.00	0.01	-0.00	-0.00	]
C [	-0.00	0.01	0.00	-0.00	-0.00	0.01	0.00	-0.00	-0.00	0.02	0.00	-0.00	-0.00	0.04	-0.00	-0.00	-0.00	0.04	-0.00	-0.00	-0.00	0.03	-0.00	-0.00	-0.00	0.02	0.00	0.00	-0.00	0.01	0.00	0.00	0.00	]
G [	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	-0.00	0.00	0.00	0.00	-0.00	0.00	-0.00	0.00	-0.00	-0.00	-0.00	0.00	-0.00	0.00	-0.00	0.00	-0.00	-0.00	-0.00	0.00	-0.00	-0.00	]
T [	0.01	-0.00	-0.00	0.00	0.01	-0.00	-0.00	0.01	0.03	-0.00	-0.00	0.02	0.04	-0.00	-0.00	0.03	0.05	-0.00	-0.00	0.03	0.05	-0.00	-0.00	0.02	0.03	-0.00	-0.00	0.01	0.02	-0.00	-0.00	0.01	0.01	]

Frequency matrix

A [	774	780	1479	736	711	730	1590	596	560	611	1987	416	350	414	2599	262	149	221	3041	144	26	62	3368	38	18	53	3383	41	13	70	3216	69	64	126	2943	312	196	417	2559	686	327	819	2117	745	498	1037	1646	735	578	1090	]
C [	671	1243	633	826	670	1364	580	795	574	1687	475	730	411	2402	286	607	141	2942	169	435	31	3308	36	367	10	3345	34	378	31	3256	100	478	71	3047	229	647	411	2384	333	698	683	1776	384	698	775	1340	559	717	678	1139	]
G [	519	536	560	525	503	464	536	447	490	388	489	330	323	232	299	217	176	139	172	103	67	42	84	67	35	35	70	54	24	36	125	95	86	61	170	214	185	159	313	321	233	282	352	419	352	426	424	481	555	518	]
T [	1543	948	835	1420	1623	949	801	1669	1883	821	556	2031	2423	459	323	2421	3041	205	125	2825	3383	95	19	3035	3444	74	20	3034	3439	145	66	2865	3286	273	165	2334	2715	547	302	1802	2264	630	654	1645	1882	704	878	1574	1696	760	]

Hypothetical CWM

A [	-0.00	0.00	0.01	-0.00	-0.01	0.01	0.02	-0.00	-0.01	0.01	0.03	-0.01	-0.02	0.01	0.04	-0.01	-0.02	0.01	0.04	-0.01	-0.02	0.01	0.03	-0.01	-0.02	0.01	0.02	-0.01	-0.01	0.00	0.01	-0.01	-0.01	]
C [	-0.01	0.01	-0.00	-0.00	-0.01	0.01	-0.00	-0.00	-0.02	0.02	-0.01	-0.00	-0.03	0.04	-0.01	-0.00	-0.03	0.04	-0.01	-0.00	-0.03	0.04	-0.01	0.00	-0.02	0.03	-0.00	0.00	-0.01	0.02	0.00	0.00	-0.01	]
G [	0.00	-0.00	0.00	0.00	0.01	-0.01	0.01	0.00	0.01	-0.01	0.01	-0.00	0.00	-0.02	0.01	-0.00	0.00	-0.03	0.01	-0.01	0.00	-0.02	0.00	-0.00	0.00	-0.02	0.00	-0.00	0.00	-0.01	0.00	-0.00	0.00	]
T [	0.01	-0.01	-0.01	0.01	0.02	-0.01	-0.01	0.01	0.03	-0.01	-0.02	0.02	0.04	-0.02	-0.03	0.03	0.05	-0.02	-0.03	0.03	0.05	-0.01	-0.02	0.02	0.04	-0.01	-0.01	0.01	0.02	-0.00	-0.01	0.01	0.01	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 5351

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2761

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1315

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 722

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 696

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 295

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 227

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 128

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 27

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_17

Num. of seqlets: 21

CWM

PFM

HCWM

8 profiles found for the same TF (ZNF24) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000931.1	ZNF24	ENCSR099NCH	K562	Homo sapiens	MA1124.1
BP000932.1	ZNF24	ENCSR117WTM	K562	Homo sapiens	MA1124.1
BP000933.1	ZNF24	ENCSR362NWP	HepG2	Homo sapiens	MA1124.1
BP000934.1	ZNF24	ENCSR385AHH	K562	Homo sapiens	MA1124.1
BP000935.1	ZNF24	ENCSR503VTG	MCF-7	Homo sapiens	MA1124.1
BP000936.1	ZNF24	ENCSR695EQB	K562	Homo sapiens	MA1124.1
BP000937.1	ZNF24	ENCSR791AGT	HepG2	Homo sapiens	MA1124.1
BP000938.1	ZNF24	ENCSR984MDV	HEK293	Homo sapiens	MA1124.1