JASPAR - ZNF24 - BP000930.1

This page shows detailed deep learning-derived predictions and motifs for ZNF24 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ZNF24
Model ID:	BP000930.1
Cell line/tissue:	GM12878
Class:	C2H2 zinc finger factors
Family:	More than 3 adjacent zinc fingers
JASPAR ID:	MA1124.1
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P17028
Source:	ENCSR072PWP
Model:	BPNet
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Sequence logo

Motif name: counts.pos_patterns.pattern_1

Number of seqlets: 3507

Contribution weight matrix (CWM)

A [	0.01	0.01	-0.00	-0.00	0.02	0.01	-0.00	-0.00	0.03	0.02	-0.00	-0.00	0.05	0.03	-0.00	-0.00	0.05	0.03	-0.00	-0.00	0.04	0.02	-0.00	-0.00	0.03	0.01	-0.00	-0.00	0.01	0.00	-0.00	-0.00	0.01	]
C [	-0.00	-0.00	0.00	-0.00	-0.00	-0.00	0.00	-0.00	0.00	-0.00	0.00	-0.00	-0.00	-0.00	0.00	-0.00	0.00	-0.00	0.00	0.00	0.00	-0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	]
G [	0.00	0.00	0.00	0.01	-0.00	0.00	0.00	0.02	-0.00	-0.00	-0.00	0.03	-0.00	-0.00	-0.00	0.04	-0.00	-0.00	-0.00	0.04	-0.00	-0.00	0.00	0.02	-0.00	-0.00	0.00	0.01	-0.00	-0.00	0.00	0.01	-0.00	]
T [	-0.00	-0.00	0.01	0.00	-0.00	-0.00	0.02	0.00	-0.00	-0.00	0.03	0.00	-0.00	-0.00	0.04	0.00	-0.00	-0.00	0.04	0.00	-0.00	0.00	0.03	0.00	-0.00	0.00	0.02	0.00	-0.00	0.00	0.01	0.00	-0.00	]

Frequency matrix

A [	760	1696	1574	878	704	1882	1645	654	630	2264	1802	302	547	2715	2334	165	273	3286	2865	66	145	3439	3034	20	74	3444	3035	19	95	3383	2825	125	205	3041	2421	323	459	2423	2031	556	821	1883	1669	801	949	1623	1420	835	948	1543	]
C [	518	555	481	424	426	352	419	352	282	233	321	313	159	185	214	170	61	86	95	125	36	24	54	70	35	35	67	84	42	67	103	172	139	176	217	299	232	323	330	489	388	490	447	536	464	503	525	560	536	519	]
G [	1139	678	717	559	1340	775	698	384	1776	683	698	333	2384	411	647	229	3047	71	478	100	3256	31	378	34	3345	10	367	36	3308	31	435	169	2942	141	607	286	2402	411	730	475	1687	574	795	580	1364	670	826	633	1243	671	]
T [	1090	578	735	1646	1037	498	745	2117	819	327	686	2559	417	196	312	2943	126	64	69	3216	70	13	41	3383	53	18	38	3368	62	26	144	3041	221	149	262	2599	414	350	416	1987	611	560	596	1590	730	711	736	1479	780	774	]

Hypothetical CWM

A [	0.01	0.01	-0.01	-0.00	0.02	0.01	-0.01	-0.01	0.04	0.02	-0.02	-0.01	0.05	0.03	-0.03	-0.02	0.05	0.03	-0.03	-0.02	0.04	0.02	-0.02	-0.01	0.03	0.01	-0.01	-0.01	0.02	0.01	-0.01	-0.01	0.01	]
C [	0.00	-0.00	0.00	-0.01	0.00	-0.00	0.00	-0.02	0.00	-0.00	0.00	-0.02	0.00	-0.01	0.01	-0.03	0.00	-0.00	0.01	-0.02	0.00	-0.00	0.01	-0.01	0.01	0.00	0.01	-0.01	0.01	0.00	0.00	-0.00	0.00	]
G [	-0.01	0.00	0.00	0.02	-0.01	0.00	-0.00	0.03	-0.02	0.00	-0.01	0.04	-0.03	-0.00	-0.01	0.04	-0.03	-0.00	-0.01	0.04	-0.03	-0.00	-0.01	0.02	-0.02	-0.00	-0.00	0.01	-0.01	-0.00	-0.00	0.01	-0.01	]
T [	-0.01	-0.01	0.01	0.00	-0.01	-0.01	0.02	0.01	-0.02	-0.01	0.03	0.01	-0.02	-0.01	0.04	0.01	-0.02	-0.01	0.04	0.01	-0.02	-0.01	0.03	0.01	-0.01	-0.00	0.02	0.01	-0.01	-0.00	0.01	0.00	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 5351

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2761

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1315

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 722

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 696

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 295

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 227

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 128

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 27

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_17

Num. of seqlets: 21

CWM

PFM

HCWM

8 profiles found for the same TF (ZNF24) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000931.1	ZNF24	ENCSR099NCH	K562	Homo sapiens	MA1124.1
BP000932.1	ZNF24	ENCSR117WTM	K562	Homo sapiens	MA1124.1
BP000933.1	ZNF24	ENCSR362NWP	HepG2	Homo sapiens	MA1124.1
BP000934.1	ZNF24	ENCSR385AHH	K562	Homo sapiens	MA1124.1
BP000935.1	ZNF24	ENCSR503VTG	MCF-7	Homo sapiens	MA1124.1
BP000936.1	ZNF24	ENCSR695EQB	K562	Homo sapiens	MA1124.1
BP000937.1	ZNF24	ENCSR791AGT	HepG2	Homo sapiens	MA1124.1
BP000938.1	ZNF24	ENCSR984MDV	HEK293	Homo sapiens	MA1124.1