Detailed information of deep learning profile BP000829.1

This page shows detailed deep learning-derived predictions and motifs for RELA in GM18526 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: RELA
Model ID: BP000829.1
Cell line/tissue: GM18526
Class: Rel homology region (RHR) factors
Family: NF-kappaB-related factors
JASPAR ID: MA0107.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q04206  
Source: ENCSR000EBA
Model: BPNet
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Contribution weight matrix (CWM)

A [ -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.01 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.01 0.01 0.01 0.00 -0.00 -0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.01 0.01 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 0.00 0.00 -0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

A [ 57 75 85 64 68 65 53 75 69 80 62 77 56 61 57 57 58 70 70 53 53 53 41 33 2 3 179 257 206 27 12 1 3 5 78 63 57 56 53 60 52 55 54 63 65 57 76 75 55 59 ]
C [ 82 76 66 55 63 55 75 61 73 73 67 64 69 75 71 51 58 63 55 68 75 90 73 18 0 0 3 1 5 36 129 260 257 248 76 49 74 73 76 79 74 77 84 85 62 84 64 66 78 75 ]
G [ 61 60 54 68 67 66 81 61 63 52 68 69 71 53 63 85 77 79 77 85 79 57 67 122 256 254 73 0 8 46 2 0 1 6 25 82 68 51 72 57 75 59 54 62 59 64 67 64 57 60 ]
T [ 61 50 56 74 63 75 52 64 56 56 64 51 65 72 70 68 68 49 59 55 54 61 80 88 3 4 6 3 42 152 118 0 0 2 82 67 62 81 60 65 60 70 69 51 75 56 54 56 71 67 ]

Hypothetical CWM

A [ -0.00 -0.00 -0.00 -0.00 -0.01 -0.01 -0.00 0.00 0.01 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.01 -0.01 -0.01 -0.00 -0.00 0.00 0.01 0.01 0.01 0.00 -0.00 -0.00 0.00 ]
G [ -0.00 -0.00 -0.00 0.00 0.01 0.01 0.01 0.00 -0.00 -0.01 -0.01 -0.01 -0.01 -0.00 -0.00 0.00 0.00 -0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.01 0.00 -0.00 -0.01 -0.01 -0.00 -0.00 -0.00 -0.00 ]

9 profiles found for the same TF (RELA) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000825.1 RELA ENCSR000EAG GM12878 Homo sapiens MA0107.1
BP000826.1 RELA ENCSR000EAI GM12891 Homo sapiens MA0107.1
BP000827.1 RELA ENCSR000EAN GM12892 Homo sapiens MA0107.1
BP000828.1 RELA ENCSR000EAQ GM15510 Homo sapiens MA0107.1
BP000830.1 RELA ENCSR000EBD GM18951 Homo sapiens MA0107.1
BP000831.1 RELA ENCSR000EBI GM19099 Homo sapiens MA0107.1
BP000832.1 RELA ENCSR000EBM GM19193 Homo sapiens MA0107.1
BP000833.1 RELA ENCSR580HOI HepG2 Homo sapiens MA0107.1
BP000834.1 RELA ENCSR664POU GM12878 Homo sapiens MA0107.1
Showing 9 profiles of page 1 from 1 pages
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