Detailed information of deep learning profile BP000829.1

This page shows detailed deep learning-derived predictions and motifs for RELA in GM18526 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: RELA
Model ID: BP000829.1
Cell line/tissue: GM18526
Class: Rel homology region (RHR) factors
Family: NF-kappaB-related factors
JASPAR ID: MA0107.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q04206  
Source: ENCSR000EBA
Model: BPNet
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Contribution weight matrix (CWM)

A [ -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 -0.00 0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.01 0.01 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 -0.00 -0.00 0.00 0.01 0.01 0.01 0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.01 0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

A [ 67 71 56 54 56 75 51 69 70 60 65 60 81 62 67 82 2 0 0 118 152 42 3 6 4 3 88 80 61 54 55 59 49 68 68 70 72 65 51 64 56 56 64 52 75 63 74 56 50 61 ]
C [ 60 57 64 67 64 59 62 54 59 75 57 72 51 68 82 25 6 1 0 2 46 8 0 73 254 256 122 67 57 79 85 77 79 77 85 63 53 71 69 68 52 63 61 81 66 67 68 54 60 61 ]
G [ 75 78 66 64 84 62 85 84 77 74 79 76 73 74 49 76 248 257 260 129 36 5 1 3 0 0 18 73 90 75 68 55 63 58 51 71 75 69 64 67 73 73 61 75 55 63 55 66 76 82 ]
T [ 59 55 75 76 57 65 63 54 55 52 60 53 56 57 63 78 5 3 1 12 27 206 257 179 3 2 33 41 53 53 53 70 70 58 57 57 61 56 77 62 80 69 75 53 65 68 64 85 75 57 ]

Hypothetical CWM

A [ -0.00 -0.00 -0.00 -0.00 -0.01 -0.01 -0.00 0.00 0.01 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.01 -0.01 -0.01 -0.01 -0.00 0.00 0.01 0.01 0.01 0.00 -0.00 -0.00 -0.00 ]
G [ 0.00 -0.00 -0.00 0.00 0.01 0.01 0.01 0.00 -0.00 -0.00 -0.01 -0.01 -0.01 -0.00 -0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.01 0.00 -0.00 -0.01 -0.01 -0.00 -0.00 -0.00 -0.00 ]

9 profiles found for the same TF (RELA) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000825.1 RELA ENCSR000EAG GM12878 Homo sapiens MA0107.1
BP000826.1 RELA ENCSR000EAI GM12891 Homo sapiens MA0107.1
BP000827.1 RELA ENCSR000EAN GM12892 Homo sapiens MA0107.1
BP000828.1 RELA ENCSR000EAQ GM15510 Homo sapiens MA0107.1
BP000830.1 RELA ENCSR000EBD GM18951 Homo sapiens MA0107.1
BP000831.1 RELA ENCSR000EBI GM19099 Homo sapiens MA0107.1
BP000832.1 RELA ENCSR000EBM GM19193 Homo sapiens MA0107.1
BP000833.1 RELA ENCSR580HOI HepG2 Homo sapiens MA0107.1
BP000834.1 RELA ENCSR664POU GM12878 Homo sapiens MA0107.1
Showing 9 profiles of page 1 from 1 pages
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