Detailed information of deep learning profile BP000656.1

This page shows detailed deep learning-derived predictions and motifs for FOXA1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: FOXA1
Model ID: BP000656.1
Cell line/tissue: K562
Class: Fork head/winged helix factors
Family: FOX
JASPAR ID: MA0148.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P55317  
Source: ENCSR819LHG
Model: BPNet
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Contribution weight matrix (CWM)

A [ -0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.00 0.00 -0.00 0.01 0.00 -0.00 -0.00 0.00 ]
C [ -0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.01 -0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 0.01 -0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 ]
T [ 0.00 0.00 0.00 0.00 0.01 -0.00 0.01 0.01 0.01 -0.00 0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

A [ 219 251 230 273 270 300 244 260 255 235 260 252 260 273 265 211 148 185 195 29 158 37 6 42 779 42 425 60 656 245 169 213 312 226 228 285 271 240 278 262 289 251 265 258 276 296 272 251 246 247 ]
C [ 258 229 227 207 239 205 211 188 240 235 254 238 220 226 216 183 366 285 223 9 10 15 13 15 6 812 121 474 22 100 284 227 205 232 220 235 224 245 236 230 216 232 227 231 246 227 199 227 229 233 ]
G [ 220 215 256 216 216 218 223 202 212 209 247 249 222 173 218 233 214 162 193 12 801 6 67 168 168 22 9 50 32 471 266 301 235 213 200 179 197 204 207 225 198 201 213 210 184 194 237 208 233 208 ]
T [ 277 279 261 278 249 251 296 324 267 295 213 235 272 302 275 347 246 342 363 924 5 916 888 749 21 98 419 390 264 158 255 233 222 303 326 275 282 285 253 257 271 290 269 275 268 257 266 288 266 286 ]

Hypothetical CWM

A [ -0.00 -0.00 -0.00 -0.00 -0.00 0.01 -0.00 -0.01 -0.00 0.01 -0.00 0.01 -0.01 0.01 -0.00 -0.00 -0.00 0.00 ]
C [ -0.00 0.00 -0.00 -0.00 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 0.01 -0.01 0.01 -0.01 -0.00 0.00 0.00 -0.00 ]
G [ -0.00 -0.00 -0.00 0.00 -0.01 0.01 -0.01 -0.00 -0.00 0.00 -0.01 -0.01 -0.01 -0.01 0.00 -0.00 0.00 -0.00 ]
T [ 0.00 0.00 0.00 0.00 0.01 -0.01 0.01 0.01 0.01 -0.01 -0.00 0.00 0.01 0.00 -0.00 -0.00 -0.00 -0.00 ]

12 profiles found for the same TF (FOXA1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000645.1 FOXA1 ENCSR000BKW Ishikawa Homo sapiens MA0148.5
BP000646.1 FOXA1 ENCSR000BKY T47D Homo sapiens MA0148.5
BP000647.1 FOXA1 ENCSR000BLE HepG2 Homo sapiens MA0148.5
BP000648.1 FOXA1 ENCSR000BMO HepG2 Homo sapiens MA0148.5
BP000649.1 FOXA1 ENCSR000BPX A549 Homo sapiens MA0148.5
BP000650.1 FOXA1 ENCSR000BRD A549 Homo sapiens MA0148.5
BP000651.1 FOXA1 ENCSR094WHO HEK293T Homo sapiens MA0148.5
BP000652.1 FOXA1 ENCSR126YEB MCF-7 Homo sapiens MA0148.5
BP000653.1 FOXA1 ENCSR267DFA HepG2 Homo sapiens MA0148.5
BP000654.1 FOXA1 ENCSR324RCI liver Homo sapiens MA0148.5
Showing 10 profiles of page 1 from 2 pages