Detailed information of deep learning profile BP000656.1

This page shows detailed deep learning-derived predictions and motifs for FOXA1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: FOXA1
Model ID: BP000656.1
Cell line/tissue: K562
Class: Fork head/winged helix factors
Family: FOX
JASPAR ID: MA0148.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P55317  
Source: ENCSR819LHG
Model: BPNet
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Contribution weight matrix (CWM)

A [ -0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 0.01 0.01 0.01 -0.00 0.01 0.00 0.00 0.00 0.00 ]
C [ 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 0.00 -0.00 0.01 -0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 -0.00 0.00 -0.00 0.01 -0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 ]
T [ 0.00 -0.00 -0.00 0.00 0.01 -0.00 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

A [ 286 266 288 266 257 268 275 269 290 271 257 253 285 282 275 326 303 222 233 255 158 264 390 419 98 21 749 888 916 5 924 363 342 246 347 275 302 272 235 213 295 267 324 296 251 249 278 261 279 277 ]
C [ 208 233 208 237 194 184 210 213 201 198 225 207 204 197 179 200 213 235 301 266 471 32 50 9 22 168 168 67 6 801 12 193 162 214 233 218 173 222 249 247 209 212 202 223 218 216 216 256 215 220 ]
G [ 233 229 227 199 227 246 231 227 232 216 230 236 245 224 235 220 232 205 227 284 100 22 474 121 812 6 15 13 15 10 9 223 285 366 183 216 226 220 238 254 235 240 188 211 205 239 207 227 229 258 ]
T [ 247 246 251 272 296 276 258 265 251 289 262 278 240 271 285 228 226 312 213 169 245 656 60 425 42 779 42 6 37 158 29 195 185 148 211 265 273 260 252 260 235 255 260 244 300 270 273 230 251 219 ]

Hypothetical CWM

A [ -0.00 -0.00 -0.00 -0.00 0.00 0.01 0.00 -0.00 -0.01 0.01 0.01 0.01 -0.01 0.01 0.00 0.00 0.00 0.00 ]
C [ -0.00 0.00 -0.00 0.00 -0.01 -0.01 -0.01 -0.01 0.00 -0.00 -0.00 -0.01 0.01 -0.01 0.00 -0.00 -0.00 -0.00 ]
G [ -0.00 0.00 0.00 -0.00 -0.01 0.01 -0.01 0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.00 -0.00 0.00 -0.00 ]
T [ 0.00 -0.00 -0.00 -0.00 0.01 -0.01 0.01 -0.00 0.01 -0.00 -0.01 -0.00 0.01 -0.00 -0.00 -0.00 -0.00 -0.00 ]

12 profiles found for the same TF (FOXA1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000645.1 FOXA1 ENCSR000BKW Ishikawa Homo sapiens MA0148.5
BP000646.1 FOXA1 ENCSR000BKY T47D Homo sapiens MA0148.5
BP000647.1 FOXA1 ENCSR000BLE HepG2 Homo sapiens MA0148.5
BP000648.1 FOXA1 ENCSR000BMO HepG2 Homo sapiens MA0148.5
BP000649.1 FOXA1 ENCSR000BPX A549 Homo sapiens MA0148.5
BP000650.1 FOXA1 ENCSR000BRD A549 Homo sapiens MA0148.5
BP000651.1 FOXA1 ENCSR094WHO HEK293T Homo sapiens MA0148.5
BP000652.1 FOXA1 ENCSR126YEB MCF-7 Homo sapiens MA0148.5
BP000653.1 FOXA1 ENCSR267DFA HepG2 Homo sapiens MA0148.5
BP000654.1 FOXA1 ENCSR324RCI liver Homo sapiens MA0148.5
Showing 10 profiles of page 1 from 2 pages