Summary information of deep learning profile DL0059.1

This page shows the summary of all deep learning-derived profiles and motifs for RFX1. Please scroll down the page to browse individual datasets.

Profile summary

Name: RFX1
Profile ID: DL0059.1
Class: Fork head/winged helix factors
Family: RFX-related factors
JASPAR ID: MA0509.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P48743  
Source: ENCODE
Number of datasets: 5
Models: BPNet

Sequence logo

Contribution weight matrix (CWM)

A [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.01 -0.00 -0.00 0.07 0.00 0.00 0.00 -0.00 0.02 0.06 -0.00 0.00 0.00 -0.00 0.00 ]
C [ 0.00 0.00 0.01 0.00 -0.00 -0.00 0.00 -0.00 0.12 0.09 -0.00 -0.00 -0.00 0.00 0.02 -0.00 0.00 0.06 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 -0.00 0.00 0.14 -0.00 -0.00 0.06 -0.00 -0.00 -0.00 -0.00 0.11 0.10 0.00 0.01 -0.00 -0.00 0.00 0.01 0.00 0.00 ]
T [ 0.00 0.00 0.00 0.00 -0.00 0.13 0.06 -0.00 0.00 0.02 0.00 0.04 -0.00 -0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]

Common motifs

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 10363

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3761

5 models found for RFX1

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001005.1 RFX1 ENCSR041AXL K562 Homo sapiens MA0509.3
BP001006.1 RFX1 ENCSR066TET MCF-7 Homo sapiens MA0509.3
BP001007.1 RFX1 ENCSR788XNX MCF-7 Homo sapiens MA0509.3
BP001008.1 RFX1 ENCSR928API HepG2 Homo sapiens MA0509.3
BP001009.1 RFX1 ENCSR968GIB K562 Homo sapiens MA0509.3
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