JASPAR - SP1 - BP001109.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for SP1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	SP1
Model ID:	BP001109.1
Cell line/tissue:	K562
Class:	C2H2 zinc finger factors
Family:	Three-zinc finger Kruppel-related
JASPAR ID:	MA0079.5
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P08047
Source:	ENCSR372IML
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 7353

Contribution weight matrix (CWM)

A [	0.00	0.00	0.00	-0.00	-0.00	0.00	0.00	-0.00	0.00	0.00	0.00	-0.00	-0.00	0.00	]
C [	0.00	0.00	-0.00	0.01	0.01	0.01	0.03	0.00	0.03	0.03	0.02	0.00	-0.00	-0.00	]
G [	-0.00	0.00	0.01	-0.00	0.00	0.00	-0.00	0.02	0.00	0.00	0.00	-0.00	-0.00	-0.00	]
T [	0.00	-0.00	-0.00	0.00	0.00	-0.00	-0.00	-0.00	-0.00	0.00	0.00	0.00	0.00	0.00	]

Frequency matrix

A [	1281	1180	1194	1208	1213	1173	1133	1052	1123	1224	1076	1059	913	1158	2281	1988	863	411	382	1275	0	454	2	0	11	1794	428	1122	1162	1103	974	902	924	1095	1189	1223	1224	1210	1190	1219	1220	1213	1211	1217	1331	1305	1290	1239	1239	1245	]
C [	2554	2615	2673	2680	2586	2799	2819	2985	2992	2835	3018	2986	3279	2818	2076	975	295	5355	5609	6026	7342	16	7329	7342	6645	4500	4177	2066	2510	3411	2997	2833	2680	2818	2848	2834	2886	2664	2784	2740	2795	2687	2698	2713	2559	2630	2525	2599	2545	2493	]
G [	2196	2207	2091	2173	2198	1992	2000	1979	1939	1980	2170	1961	1811	1989	1245	3719	5722	708	60	42	1	6453	21	10	27	155	866	1244	1859	1706	2073	2321	2529	2137	1997	2056	1935	2040	1936	2023	1939	2048	2100	2071	2128	2064	2075	2156	2168	2253	]
T [	1322	1351	1395	1292	1356	1389	1401	1337	1299	1314	1089	1347	1350	1388	1751	671	473	879	1302	10	10	430	1	1	670	904	1882	2921	1822	1133	1309	1297	1220	1303	1319	1240	1308	1439	1443	1371	1399	1405	1344	1352	1335	1354	1463	1359	1401	1362	]

Hypothetical CWM

A [	-0.00	0.00	0.00	0.00	-0.00	-0.00	0.01	-0.02	-0.01	-0.01	-0.02	-0.01	0.00	-0.01	-0.00	0.00	]
C [	0.00	0.00	0.00	-0.01	0.01	0.01	0.02	0.03	-0.01	0.03	0.03	0.02	0.01	0.01	-0.00	-0.00	]
G [	-0.00	-0.00	0.00	0.01	0.00	-0.01	-0.00	-0.01	0.03	-0.01	-0.01	-0.01	-0.01	-0.00	-0.00	-0.00	]
T [	0.00	0.00	-0.00	-0.00	0.00	0.00	-0.02	-0.02	-0.01	-0.02	-0.02	0.00	-0.00	0.00	0.01	0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2467

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 257

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 138

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 129

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 128

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 102

CWM

PFM

HCWM

7 profiles found for the same TF (SP1) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP001106.1	SP1	ENCSR000BHK	GM12878	Homo sapiens	MA0079.5
BP001107.1	SP1	ENCSR000BIR	H1	Homo sapiens	MA0079.5
BP001108.1	SP1	ENCSR000BKO	K562	Homo sapiens	MA0079.5
BP001110.1	SP1	ENCSR460YAM	HepG2	Homo sapiens	MA0079.5
BP001111.1	SP1	ENCSR583CGO	WTC11	Homo sapiens	MA0079.5
BP001112.1	SP1	ENCSR729LGA	MCF-7	Homo sapiens	MA0079.5
BP001113.1	SP1	ENCSR991ELG	K562	Homo sapiens	MA0079.5