JASPAR - SP1 - BP001107.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for SP1 in H1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	SP1
Model ID:	BP001107.1
Cell line/tissue:	H1
Class:	C2H2 zinc finger factors
Family:	Three-zinc finger Kruppel-related
JASPAR ID:	MA0079.5
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P08047
Source:	ENCSR000BIR
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_1

Number of seqlets: 2748

Contribution weight matrix (CWM)

A [	0.00	0.00	0.00	0.00	-0.00	-0.00	0.00	0.00	0.00	-0.00	0.00	0.00	0.00	-0.00	0.00	0.00	]
C [	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.01	0.00	0.00	0.00	-0.00	0.01	-0.00	-0.00	]
G [	0.00	0.00	0.00	0.02	0.02	0.03	0.04	0.03	0.00	0.02	0.02	0.02	0.01	0.00	0.00	0.00	]
T [	-0.00	-0.00	-0.00	-0.00	0.00	0.00	0.00	0.00	-0.00	-0.00	-0.00	-0.00	-0.00	0.00	0.00	0.00	]

Frequency matrix

A [	630	591	596	608	650	637	688	594	573	603	631	632	588	629	611	563	516	503	536	444	544	803	291	81	71	2	9	1109	220	10	209	224	518	570	656	638	655	650	541	586	693	557	596	664	608	631	583	715	648	581	]
C [	724	810	713	678	683	669	676	709	657	771	624	651	682	690	642	734	742	611	504	515	569	291	88	30	21	1	6	1241	12	40	36	117	1447	861	318	660	596	539	770	739	564	637	664	630	820	658	692	712	677	702	]
G [	789	800	813	859	838	925	849	877	953	862	908	910	945	937	1017	1003	1005	1137	1322	1425	993	655	2295	2465	2653	2743	2733	103	2363	2584	2431	2276	403	748	952	982	1051	1113	943	914	1024	966	880	913	845	846	946	819	884	914	]
T [	605	547	626	603	577	517	535	568	565	512	585	555	533	492	478	448	485	497	386	364	642	999	74	172	3	2	0	295	153	114	72	131	380	569	822	468	446	446	494	509	467	588	608	541	475	613	527	502	539	551	]

Hypothetical CWM

A [	0.00	0.00	0.00	0.00	-0.00	-0.01	-0.01	-0.01	-0.00	-0.00	-0.01	-0.01	0.00	0.00	-0.00	0.00	]
C [	0.00	0.00	0.00	0.00	0.00	0.00	0.00	-0.00	-0.01	0.01	-0.00	0.00	-0.00	0.00	0.01	-0.00	]
G [	0.01	0.01	0.01	0.01	0.02	0.02	0.03	0.04	0.03	0.02	0.03	0.02	0.02	0.01	0.00	0.00	]
T [	-0.00	-0.00	0.00	-0.00	-0.01	-0.01	-0.02	-0.02	-0.02	-0.01	-0.01	-0.01	-0.01	-0.00	0.00	0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 4041

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2679

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 962

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 903

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 661

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 269

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 49

CWM

PFM

HCWM

7 profiles found for the same TF (SP1) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP001106.1	SP1	ENCSR000BHK	GM12878	Homo sapiens	MA0079.5
BP001108.1	SP1	ENCSR000BKO	K562	Homo sapiens	MA0079.5
BP001109.1	SP1	ENCSR372IML	K562	Homo sapiens	MA0079.5
BP001110.1	SP1	ENCSR460YAM	HepG2	Homo sapiens	MA0079.5
BP001111.1	SP1	ENCSR583CGO	WTC11	Homo sapiens	MA0079.5
BP001112.1	SP1	ENCSR729LGA	MCF-7	Homo sapiens	MA0079.5
BP001113.1	SP1	ENCSR991ELG	K562	Homo sapiens	MA0079.5