Detailed information of deep learning profile BP001108.1

This page shows detailed deep learning-derived predictions and motifs for SP1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: SP1
Model ID: BP001108.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
JASPAR ID: MA0079.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P08047  
Source: ENCSR000BKO
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ 0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 ]
C [ -0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.00 0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.01 0.01 0.01 0.00 0.01 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ 0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 ]

Frequency matrix

A [ 82 72 72 74 71 62 70 74 57 69 58 52 56 57 54 48 51 58 62 175 77 7 11 2 0 1 1 0 55 34 13 17 75 88 123 83 45 68 68 52 71 69 71 46 76 71 82 70 73 78 ]
C [ 99 103 113 103 102 94 101 93 97 115 112 106 93 102 153 156 69 75 82 65 70 6 1 1 3 384 0 2 4 12 351 246 30 39 41 87 150 92 75 67 87 113 112 105 87 116 95 104 124 106 ]
G [ 150 154 147 163 164 178 165 181 188 163 184 176 181 197 152 158 224 199 205 102 221 333 385 395 395 13 398 381 336 341 18 90 171 236 211 166 159 186 204 236 182 165 145 194 180 162 158 145 145 150 ]
T [ 68 70 67 59 62 65 63 51 57 52 45 65 69 43 40 37 55 67 50 57 31 53 2 1 1 1 0 16 4 12 17 46 123 36 24 63 45 53 52 44 59 52 71 54 56 50 64 80 57 65 ]

Hypothetical CWM

A [ -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.01 -0.01 -0.01 -0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 ]
C [ -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.01 0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.01 0.01 0.01 0.00 0.01 0.01 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 ]
T [ 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.01 -0.01 -0.01 -0.01 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 4135

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 178

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 48

7 profiles found for the same TF (SP1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001106.1 SP1 ENCSR000BHK GM12878 Homo sapiens MA0079.5
BP001107.1 SP1 ENCSR000BIR H1 Homo sapiens MA0079.5
BP001109.1 SP1 ENCSR372IML K562 Homo sapiens MA0079.5
BP001110.1 SP1 ENCSR460YAM HepG2 Homo sapiens MA0079.5
BP001111.1 SP1 ENCSR583CGO WTC11 Homo sapiens MA0079.5
BP001112.1 SP1 ENCSR729LGA MCF-7 Homo sapiens MA0079.5
BP001113.1 SP1 ENCSR991ELG K562 Homo sapiens MA0079.5
Showing 7 profiles of page 1 from 1 pages
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