Detailed information of deep learning profile BP001108.1

This page shows detailed deep learning-derived predictions and motifs for SP1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: SP1
Model ID: BP001108.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
JASPAR ID: MA0079.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P08047  
Source: ENCSR000BKO
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.01 0.00 0.01 0.01 0.01 0.00 0.00 0.00 0.00 0.00 ]
G [ -0.00 -0.00 -0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 ]
T [ 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 ]

Frequency matrix

A [ 65 57 80 64 50 56 54 71 52 59 44 52 53 45 63 24 36 123 46 17 12 4 16 0 1 1 1 2 53 31 57 50 67 55 37 40 43 69 65 45 52 57 51 63 65 62 59 67 70 68 ]
C [ 150 145 145 158 162 180 194 145 165 182 236 204 186 159 166 211 236 171 90 18 341 336 381 398 13 395 395 385 333 221 102 205 199 224 158 152 197 181 176 184 163 188 181 165 178 164 163 147 154 150 ]
G [ 106 124 104 95 116 87 105 112 113 87 67 75 92 150 87 41 39 30 246 351 12 4 2 0 384 3 1 1 6 70 65 82 75 69 156 153 102 93 106 112 115 97 93 101 94 102 103 113 103 99 ]
T [ 78 73 70 82 71 76 46 71 69 71 52 68 68 45 83 123 88 75 17 13 34 55 0 1 1 0 2 11 7 77 175 62 58 51 48 54 57 56 52 58 69 57 74 70 62 71 74 72 72 82 ]

Hypothetical CWM

A [ 0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.01 -0.01 -0.01 -0.01 -0.00 -0.00 -0.00 -0.00 0.00 0.00 ]
C [ -0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.01 0.01 0.00 0.01 0.01 0.01 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.01 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 ]
T [ 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.01 -0.01 -0.01 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 4135

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 178

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 48

7 profiles found for the same TF (SP1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001106.1 SP1 ENCSR000BHK GM12878 Homo sapiens MA0079.5
BP001107.1 SP1 ENCSR000BIR H1 Homo sapiens MA0079.5
BP001109.1 SP1 ENCSR372IML K562 Homo sapiens MA0079.5
BP001110.1 SP1 ENCSR460YAM HepG2 Homo sapiens MA0079.5
BP001111.1 SP1 ENCSR583CGO WTC11 Homo sapiens MA0079.5
BP001112.1 SP1 ENCSR729LGA MCF-7 Homo sapiens MA0079.5
BP001113.1 SP1 ENCSR991ELG K562 Homo sapiens MA0079.5
Showing 7 profiles of page 1 from 1 pages
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