JASPAR - SP1 - BP001107.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for SP1 in H1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	SP1
Model ID:	BP001107.1
Cell line/tissue:	H1
Class:	C2H2 zinc finger factors
Family:	Three-zinc finger Kruppel-related
JASPAR ID:	MA0079.5
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P08047
Source:	ENCSR000BIR
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_1

Number of seqlets: 2748

Contribution weight matrix (CWM)

A [	0.00	0.00	0.00	-0.00	-0.00	-0.00	-0.00	-0.00	0.00	0.00	0.00	0.00	-0.00	-0.00	-0.00	-0.00	]
C [	0.00	0.00	0.00	0.01	0.02	0.02	0.02	0.00	0.03	0.04	0.03	0.02	0.02	0.00	0.00	0.00	]
G [	-0.00	-0.00	0.01	-0.00	0.00	0.00	0.00	0.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	]
T [	0.00	0.00	-0.00	0.00	0.00	0.00	-0.00	0.00	0.00	0.00	-0.00	-0.00	0.00	0.00	0.00	0.00	]

Frequency matrix

A [	551	539	502	527	613	475	541	608	588	467	509	494	446	446	468	822	569	380	131	72	114	153	295	0	2	3	172	74	999	642	364	386	497	485	448	478	492	533	555	585	512	565	568	535	517	577	603	626	547	605	]
C [	914	884	819	946	846	845	913	880	966	1024	914	943	1113	1051	982	952	748	403	2276	2431	2584	2363	103	2733	2743	2653	2465	2295	655	993	1425	1322	1137	1005	1003	1017	937	945	910	908	862	953	877	849	925	838	859	813	800	789	]
G [	702	677	712	692	658	820	630	664	637	564	739	770	539	596	660	318	861	1447	117	36	40	12	1241	6	1	21	30	88	291	569	515	504	611	742	734	642	690	682	651	624	771	657	709	676	669	683	678	713	810	724	]
T [	581	648	715	583	631	608	664	596	557	693	586	541	650	655	638	656	570	518	224	209	10	220	1109	9	2	71	81	291	803	544	444	536	503	516	563	611	629	588	632	631	603	573	594	688	637	650	608	596	591	630	]

Hypothetical CWM

A [	0.00	0.00	-0.00	-0.01	-0.01	-0.01	-0.01	-0.02	-0.02	-0.02	-0.01	-0.01	-0.00	0.00	-0.00	-0.00	]
C [	0.00	0.00	0.01	0.02	0.02	0.03	0.02	0.03	0.04	0.03	0.02	0.02	0.01	0.01	0.01	0.01	]
G [	-0.00	0.01	0.00	-0.00	0.00	-0.00	0.01	-0.01	-0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	]
T [	0.00	-0.00	0.00	0.00	-0.01	-0.01	-0.00	-0.00	-0.01	-0.01	-0.01	-0.00	0.00	0.00	0.00	0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 4041

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2679

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 962

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 903

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 661

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 269

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 49

CWM

PFM

HCWM

7 profiles found for the same TF (SP1) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP001106.1	SP1	ENCSR000BHK	GM12878	Homo sapiens	MA0079.5
BP001108.1	SP1	ENCSR000BKO	K562	Homo sapiens	MA0079.5
BP001109.1	SP1	ENCSR372IML	K562	Homo sapiens	MA0079.5
BP001110.1	SP1	ENCSR460YAM	HepG2	Homo sapiens	MA0079.5
BP001111.1	SP1	ENCSR583CGO	WTC11	Homo sapiens	MA0079.5
BP001112.1	SP1	ENCSR729LGA	MCF-7	Homo sapiens	MA0079.5
BP001113.1	SP1	ENCSR991ELG	K562	Homo sapiens	MA0079.5